New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4927328 =	26 (0.920)	4 (0.150)	4/238	NT	14.8%	coding (599/1113 nt)	cheBA	chemotaxis response regulator protein‑glutamate methylesterase
	?	NC_002947	4927360 =	21 (0.770)					coding (567/1113 nt)	cheBA	chemotaxis response regulator protein‑glutamate methylesterase

GCCGGCCAGCACCTTTACCAGCCAGGCGCAGACGCGCCCGGCAGCGCCTGCCCGTGCAGCGGCCCCGACGCCGGCGGCCTCGCAGTCGCCGGCACCCAAGCGCAAACCCTACAAACTGGTGGCCATCGGTACCTCCACGGGGGGGCCGGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4927480‑4927328 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCACGGGCAGGCGCTGCCGG  >  NC_002947/4927360‑4927443                                                                                                                                                                                                                                               GCCGGCCAGCACCTTTACCAGCCAGGCGCAGACGCGCCCGGCAGCGCCTGCCCGTGCAGCGGCCCCGACGCCGGCGGCCTCGCAGTCGCCGGCACCCAAGCGCAAACCCTACAAACTGGTGGCCATCGGTACCTCCACGGGGGGGCCGGT                                                                                         <  2:392108/150‑1                                                                                                                     TGGTGGCCATCGGTACCTCCACGGGGGGGCCGGTGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCACGGGCAGGCGCTGCCGG  <  1:440311/121‑1                                                                                                                     TGGTGGCCATCGGTACCTCCACGGGGGGGCCGGTGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCACGGGCAGGCGCTGCCGG  >  2:440311/1‑121                                                                                                                         GGCCATCGGTACCTCCACGGGGGGGCCGGTGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCACGGGCAGGC          <  1:141007/109‑1                                                                                                                         GGCCATCGGTACCTCCACGGGGGGGCCGGTGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCACGGGCAGGC          >  2:141007/1‑109                                                                                                                                                                                                                                               GCCGGCCAGCACCTTTACCAGCCAGGCGCAGACGCGCCCGGCAGCGCCTGCCCGTGCAGCGGCCCCGACGCCGGCGGCCTCGCAGTCGCCGGCACCCAAGCGCAAACCCTACAAACTGGTGGCCATCGGTACCTCCACGGGGGGGCCGGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4927480‑4927328 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCACGGGCAGGCGCTGCCGG  >  NC_002947/4927360‑4927443

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.