New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4927328 =	26 (0.920)	4 (0.150)	4/238	NT	14.8%	coding (599/1113 nt)	cheBA	chemotaxis response regulator protein‑glutamate methylesterase
	?	NC_002947	4927360 =	21 (0.770)					coding (567/1113 nt)	cheBA	chemotaxis response regulator protein‑glutamate methylesterase

TTCGGCTTCCTTGACGCTGATGCGGCACAGCTTGTCCAGGCGTTCGGCAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCACGGGCAGGCGCTGCCGGGCGCGTCTGCGCCTGGCTGGTAAAG  >  NC_002947/4927189‑4927468                                                                                                                                            |                                                                                                                                             ttCGGCTTCCTTGACGCTGATGCGGCACAGCTTGTCCAGGCGTTCGGCAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGccc                                                                                                                                    >  1:331344/1‑150 (MQ=255)      cTTCCTTGACGCTGATGCGGCACAGCTTGTCCAGGCGTTCGGCAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCg                                                                                                                               >  2:427321/1‑150 (MQ=255)          cTTGACGCTGATGCGGCACAGCTTGTCCAGGCGTTCGGCAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGa                                                                                                                           <  2:345804/150‑1 (MQ=255)           ttGACGCTGATGCGGCACAGCTTGTCCAGGCGTTCGGCAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAg                                                                                                                          <  2:245199/150‑1 (MQ=255)                         gCACAGCTTGTCCAGGCGTTCGGCAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTTGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGccac                                                                                                            >  2:289402/1‑150 (MQ=255)                                     cAGGCGTTCGGCAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAg                                                                                                  <  2:627551/148‑1 (MQ=255)                                     cAGGCGTTCGGCAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAg                                                                                                  >  1:627551/1‑148 (MQ=255)                                     cAGGCGTTCGGCAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGCACGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAggg                                                                                                >  2:60573/1‑150 (MQ=255)                                                cAAACGGTTTGGTGAAGGCCGCCGGCATGTGCTGGATCACAACGATCCCCGCCGGGAAATTTGCCGGCAGCCGTTTTGCGTCCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTgg                                                                                     <  1:355750/150‑1 (MQ=255)                                                cAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTgg                                                                                     >  2:202950/1‑150 (MQ=255)                                                      cTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTg                                                                                                                             >  1:600778/1‑104 (MQ=255)                                                      cTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTg                                                                                                                             <  2:600778/104‑1 (MQ=255)                                                        ccggcagcgcctgcccgtgcagcggccccgacgccggcggcctcgcagtcgccggcacccaagcgcaaaccctacaaactggtgGCCACCGGCCCCCCCGTGGAGGTACCGATGGccacca                                                                                                          <  1:440311‑M1/37‑1 (MQ=255)                                                        ccggcagcgcctgcccgtgcagcggccccgacgccggcggcctcgcagtcgccggcacccaagcgcaaaccctacaaactggtgGCCACCGGCCCCCCCGTGGAGGTACCGATGGccacca                                                                                                          >  2:440311‑M1/85‑121 (MQ=255)                                                                gcctgcccgtgcagcggccccgacgccggcggcctcgcagtcgccggcacccaagcgcaaaccctacaaactggtgGCCACCGGCCCCCCCGTGGAGGTACCGATGGcc                                                                                                              >  2:141007‑M1/77‑109 (MQ=255)                                                                gcctgcccgtgcagcggccccgacgccggcggcctcgcagtcgccggcacccaagcgcaaaccctacaaactggtgGCCACCGGCCCCCCCGTGGAGGTACCGATGGcc                                                                                                              <  1:141007‑M1/33‑1 (MQ=255)                                                                             tgCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTa                                                                                                   <  1:617765/107‑1 (MQ=255)                                                                             tgCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTa                                                                                                   >  2:617765/1‑107 (MQ=255)                                                                                  gATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCg                                                       <  1:178331/146‑1 (MQ=255)                                                                                  gATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCg                                                       >  2:178331/1‑146 (MQ=255)                                                                                     cAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGc                                                <  1:427321/150‑1 (MQ=255)                                                                                      aaCACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCt                                               >  2:217448/1‑150 (MQ=255)                                                                                        cacGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTAc                                                                                                                      <  1:382784/77‑1 (MQ=255)                                                                                        cacGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTAc                                                                                                                      >  2:382784/1‑77 (MQ=255)                                                                                         acGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCa                                            >  2:582634/1‑150 (MQ=255)                                                                                          cGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCAc                                           <  2:331344/150‑1 (MQ=255)                                                                                                  gcCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTATCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCACGGGCAGgc                                   <  1:202950/150‑1 (MQ=255)                                                                                                        aaaTTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCACGGGCAGGCGCTGcc                             >  2:490112/1‑150 (MQ=255)                                                                                                                                  ccGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCACGGGCAGGCGCTGCCGGGCGCGTCTGCGCCTGGCTGGTaaa   >  1:107110/1‑150 (MQ=255)                                                                                                                                   cGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCACGGGCAGGCGCTGCCGGGCGCGTCTGCGCCTGGCTGGTAAAg  <  1:289402/150‑1 (MQ=255)                                                                                                                                            |                                                                                                                                             TTCGGCTTCCTTGACGCTGATGCGGCACAGCTTGTCCAGGCGTTCGGCAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCACGGGCAGGCGCTGCCGGGCGCGTCTGCGCCTGGCTGGTAAAG  >  NC_002947/4927189‑4927468

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.