New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5636524 =	25 (0.890)	3 (0.110)	3/234	NT	10.8%	coding (841/1803 nt)	PP_4948	acyl‑CoA dehydrogenase family protein
	?	NC_002947	5636548 =	26 (0.970)					coding (865/1803 nt)	PP_4948	acyl‑CoA dehydrogenase family protein

TTGTCCGGCAGTCGGCCCTGCGGCCGCTGGCGAGCGTATTCCAGGGAGTAAAGGTAGCCGGCGTAACCCAGCATCACCGCGCCCATGCCTACGCCTATCCGCGCCTCGTTCATCATCTGGAACATGCAGGCCAGGCCCTGGTGCGGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5636675‑5636524 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccTGCATGTTCCAGATGATGAACGAGGCGCGGATAGGCGTAGGCATGGGCGCGGTGATGCTGGGTTACGCCGGCTACCTTTACTCCCTGGAAT  >  NC_002947/5636548‑5636638                                                                                                                                                                                                                                                     TTGTCCGGCAGTCGGCCCTGCGGCCGCTGGCGAGCGTATTCCAGGGAGTAAAGGTAGCCGGCGTAACCCAGCATCACCGCGCCCATGCCTACGCCTATCCGCGCCTCGTTCATCATCTGGAACATGCAGGCCAGGCCCTGGTGCGGCTGG                                                                                               <  2:421724/150‑1                          GCTGGCGAGCGTATTCCAGGGAGTAAAGGTAGCCGGCGTAACCCAGCATCACCGCGCCCATGCCTACGCCTATCCGCGCCTCGTTCATCATCTGGAACATGCAGGCCAGCCGCACCAGGGCCTGGCCTGCATGTTCCAGATGATGAACGA                                                                      <  1:585991/150‑1                                           AGGGAGTAAAGGTAGCCGGCGTAACCCAGCATCACCGCGCCCATGCCTACGCCTATCCGCGCCTCGTTCATCATCTGGAACATGCAGGCCAGGCCCTGGTGCGGCTGG                                                                                               >  1:518759/1‑108                                           AGGGAGTAAAGGTAGCCGGCGTAACCCAGCATCACCGCGCCCATGCCTACGCCTATCCGCGCCTCGTTCATCATCTGGAACATGCAGGCCAGGCCCTGGTGCGGCTGG                                                                                               <  2:518759/108‑1                                                                                                                    TCTGGAACATGCAGGCCAGGCCCTGGTGCGGCTGGCCTGCATGTTCCAGATGATGAACGAGGCGCGGATAGGCGTAGGCATGGGCGCGGTGATGCTGGGTTACGCCGGCTACCTTTACTCCCTGGAAT  >  1:673649/1‑128                                                                                                                    TCTGGAACATGCAGGCCAGGCCCTGGTGCGGCTGGCCTGCATGTTCCAGATGATGAACGAGGCGCGGATAGGCGTAGGCATGGGCGCGGTGATGCTGGGTTACGCCGGCTACCTTTACTCCCTGGAAT  <  2:673649/128‑1                                                                                                                                                                                                                                                     TTGTCCGGCAGTCGGCCCTGCGGCCGCTGGCGAGCGTATTCCAGGGAGTAAAGGTAGCCGGCGTAACCCAGCATCACCGCGCCCATGCCTACGCCTATCCGCGCCTCGTTCATCATCTGGAACATGCAGGCCAGGCCCTGGTGCGGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5636675‑5636524 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccTGCATGTTCCAGATGATGAACGAGGCGCGGATAGGCGTAGGCATGGGCGCGGTGATGCTGGGTTACGCCGGCTACCTTTACTCCCTGGAAT  >  NC_002947/5636548‑5636638

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.