New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 511921	39 (1.380)	6 (0.240)	6/216	NT	17.1%	intergenic (+58/‑90)	trpC/PP_0423	indole‑3‑glycerol phosphate synthase/hypothetical protein
	?	NC_002947	= 511969	24 (0.970)					intergenic (+106/‑42)	trpC/PP_0423	indole‑3‑glycerol phosphate synthase/hypothetical protein

GCGTTCATGCGCGCCGAGCAGCCTGGCCTGGAATTACAGCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGAGCGTCGAACAAGGCCTGCACGCCGAGCAGGA  >  NC_002947/511774‑512066                                                                                                                                                    |                                                                                                                                                  gCGTTCATGCGCGCCGAGCAGCCTGGCCTGGAATTACAGCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGta                                                                                                                                                 >  2:440390‑M1/1‑148 (MQ=255) gCGTTCATGCGCGCCGAGCAGCCTGGCCTGGAATTACAGCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCa                                                                                                                                                 >  1:315524/1‑150 (MQ=255)  cGTTCATGCGCGCCGAGCAGCCTGGCCTGGAATTACAGCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCaa                                                                                                                                                <  2:314412/150‑1 (MQ=255)    ttCATGCGCGCCGAGCAGCCTGGCCTGGAATTACAGCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGc                                                                                                                                              <  1:749264/150‑1 (MQ=255)    ttCATGCGCGCCGAGCAGCCTGGCCTGGAATTACAGCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGc                                                                                                                                              >  2:574741/1‑150 (MQ=255)        tGCGCGCCGAGCAGCCTGGCCTGCAATTAGTGCGGCTTTTCTTCGCCGAGCAGTTGAAGAAGAGTGTTCAGCAACTGAAGTGATCAAATTAAGTCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGc                                                                                                                                          <  2:39128/150‑1 (MQ=255)         gcgcgcCGAGCAGCCTGGCCTGGAATTACAGCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCt                                                                                                                                         >  2:563833/1‑150 (MQ=255)                gAGCAGCCTGGCCTGGAATTACAGCGGCTGTTCTTCCTCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGCTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCCCGGGgaaaccgcctcccaagg                                                                                                                                  >  1:648714‑M1/1‑133 (MQ=255)                  gcagcCTGGCCTGGAATTACAGCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACgg                                                                                                                                <  1:749870/150‑1 (MQ=255)                                       gCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTacac                                                                                                                                  <  2:363495/127‑1 (MQ=255)                                       gCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTAACTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTacac                                                                                                                                  >  1:363495/1‑127 (MQ=255)                                        cGGCTGTTCTTCCCCGAGCGGGTGAACAAGTCTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGGTTTTGCGGGCTTTTTTGTATCTGTAATGGCCTCTTCGCGGGCGAGGCCGCACGAACACGAGTAAGCGCTCTGTCGTAggcgt                                                                                                          >  1:512435/1‑147 (MQ=255)                                           cTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGtaaacccgctcctacgacagggcgcgtacccgtgtaggagcggg                                                                                                       <  1:440390‑M1/150‑45 (MQ=255)                                            tGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGt                                                                                                      <  2:713320/150‑1 (MQ=255)                                             gTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATAGCCTCTTCGCGGGtaaacccgctcctacgacagggcgcgtactcgtgtaggagcgggct                                                                                                     >  1:392429‑M1/1‑104 (MQ=255)                                                ctgccccGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACCCGGGTCCGCGCCCTGTCGTAGGAGCGGGTTTAc                                                                                                  >  1:750597/4‑150 (MQ=255)                                                    cccGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGtaaacccgctcctacgacagggcgcgtacccgtgtaggagcgggcttgcccgc                                                                                              <  2:392429‑M1/150‑54 (MQ=255)                                                    cccGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGCCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTAcccgc                                                                                              >  1:218506‑M2/1‑145 (MQ=255)                                                       gAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTAcccgcgaa                                                                                           <  1:721198‑M2/150‑9 (MQ=255)                                                         gCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTAcccgcgaaga                                                                                         >  2:750597‑M2/1‑140 (MQ=255)                                                           aGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTAcccgcgaagagg                                                                                       >  1:563833‑M2/1‑138 (MQ=255)                                                             gTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTAcccgcgaagaggcc                                                                                     <  1:48167‑M2/150‑15 (MQ=255)                                                                aagaagACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGt                                                                                  <  1:574741/150‑1 (MQ=255)                                                                aagaagACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGt                                                                                  >  2:577051/1‑150 (MQ=255)                                                                 agaagaCTGTTCAGCAACTGTACTGATCAAATAAAGCCGGCGTTTAACCCCCCGTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTCTACCCGCGAAGAGGCCAGTg                                                                                 <  2:512435/150‑1 (MQ=38)                                                                   aagaCTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCgg                                                                                                        <  2:115826/125‑1 (MQ=255)                                                                   aagaCTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCgg                                                                                                        >  1:115826/1‑125 (MQ=255)                                                                     gaCTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAAt                                                                             <  2:315524/150‑1 (MQ=255)                                                                        tGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCaa                                                                          >  1:536751/1‑150 (MQ=255)                                                                          ttCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTAcccgcgaaga                                                                                         <  1:752125‑M2/133‑11 (MQ=255)                                                                          ttCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTAcccgcgaaga                                                                                         >  2:752125‑M2/1‑123 (MQ=255)                                                                             aGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAAcatca                                                                     <  1:577051/150‑1 (MQ=255)                                                                              gCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTGTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAAcatcan                                                                    <  2:435254/150‑2 (MQ=255)                                                                                     gACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGa                                                             <  2:537341/150‑1 (MQ=255)                                                                                        tGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATc                                                                            >  2:98140/1‑132 (MQ=255)                                                                                        tGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATc                                                                            <  1:98140/132‑1 (MQ=255)                                                                                          aTCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGtaaacccgctcctacgacagggcgcgtacccgtgt                                                                                                                <  1:128900‑M1/94‑36 (MQ=255)                                                                                          aTCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGtaaacccgctcctacgacagggcgcgtacccgtgt                                                                                                                >  2:128900‑M1/1‑59 (MQ=255)                                                                                           tCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGcc                                                                                                                       <  1:683042/86‑1 (MQ=255)                                                                                           tCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGcc                                                                                                                       >  2:683042/1‑86 (MQ=255)                                                                                              aaTGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGAcc                                                    >  1:398716/1‑150 (MQ=255)                                                                                                     ccGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACACGCGAAGCGGCCCGTGAAATCCACATCATAGGTGGATCAATGACCGATCAAc                                             <  1:392783/150‑1 (MQ=255)                                                                                                      cGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCGTCTTCGCGGGCAAGCCCGTTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGACGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAAcc                                            >  2:302147/1‑150 (MQ=255)                                                                                                          aaaaacgCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTg                                        <  2:93865/144‑1 (MQ=255)                                                                                                           aaaacgCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTgg                                       <  2:417050/145‑1 (MQ=255)                                                                                                            ttttGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGc                                      <  2:721198/150‑1 (MQ=255)                                                                                                                 ccGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCgg                                                                                                        >  2:5408/1‑79 (MQ=255)                                                                                                                 ccGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCgg                                                                                                        <  1:5408/79‑1 (MQ=255)                                                                                                                 ccGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGa                                 <  2:398716/150‑1 (MQ=255)                                                                                                                 ccGGCTTTTTTGTACCTGTAATGGACCCTTCGCGGATAAGCTAGCACCTACAAAGGTACGCGGTCTGTGGTAGGAGCGGGTTTACCCTCGAAGACACCAGTGGACTCAACATAATACGTCGTTCAATGAACCATCAATCACTGGCCCTgg                                 >  2:252270/1‑149 (MQ=255)                                                                                                                  cGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGAg                                >  1:437252/1‑150 (MQ=255)                                                                                                                                 tGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGAGCGTCGAACAAGGCCt                 >  2:91636/1‑150 (MQ=255)                                                                                                                                       ggCCTCTTCGCGGGtaaacccgctcctacgacagggcgcgtacccgtgtaggagcgggcttgcccgcgaagaggccattacaggtacaaaaaagccggcaaaaacgccggcttcatttgatcagtccagttgctgaacagtcttcttcac           <  1:48167‑M1/150‑137 (MQ=255)                                                                                                                                         ccTCTTCGCGGGtaaacccgctcctacgacagggcgcgtacccgtgtaggagcgggcttgcccgcgaagaggccattacaggtacaaaaaagccggcaaaaacgccggcttcatttgatcagtccagttgctgaacagtcttcttcacct         >  1:563833‑M1/1‑12 (MQ=255)                                                                                                                                          ctctTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGAGCGTCGAACAAGGCCTGCACGCCGa        >  2:557499/1‑150 (MQ=255)                                                                                                                                           tctTCGCGGGtaaacccgctcctacgacagggcgcgtacccgtgtaggagcgggcttgcccgcgaagaggccattacaggtacaaaaaagccggcaaaaacgccggcttcatttgatcagtccagttgctgaacagtcttcttcacctgc       >  2:750597‑M1/1‑10 (MQ=255)                                                                                                                                           tctTCGCGGGtaaacccgctcctacgacagggcgcgtacccgtgtaggagcgggcttgcccgcgaagaggccattacaggtacaaaaaagccggcaaaaacgccggcttcatttgatcagtccagttgctgaa                        >  2:752125‑M1/1‑10 (MQ=255)                                                                                                                                           tctTCGCGGGtaaacccgctcctacgacagggcgcgtacccgtgtaggagcgggcttgcccgcgaagaggccattacaggtacaaaaaagccggcaaaaacgccggcttcatttgatcagtccagttgctgaa                        <  1:752125‑M1/133‑124 (MQ=255)                                                                                                                                           tctTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCggg                                                                                                       <  1:476302/54‑1 (MQ=255)                                                                                                                                           tctTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCggg                                                                                                       >  2:476302/1‑54 (MQ=255)                                                                                                                                           tctTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGAGCGTCGAACATGGCCTGCACGCCGAg       >  1:66975/1‑150 (MQ=255)                                                                                                                                             ttCGCGGGtaaacccgctcctacgacagggcgcgtacccgtgtaggagcgggcttgcccgcgaagaggccattacaggtacaaaaaagccggcaaaaacgccggcttcatttgatcagtccagttgctgaacagtcttcttcacctgctc     <  1:721198‑M1/150‑143 (MQ=255)                                                                                                                                               cgcgGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGAGCGTCGAACAAGGCCTGCACGCCGAGCAgg   <  2:437252/150‑1 (MQ=255)                                                                                                                                                gcgGGtaaacccgctcctacgacagggcgcgtacccgtgtaggagcgggcttggccgcgaagaggccattacaggtacaaaaaagccggcaaaaacgccggcttcatttgatcagtccagttgctgaacagtcttcttcacctgctcggg  >  1:218506‑M1/1‑5 (MQ=255)                                                                                                                                                gcgGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTAcccgcgaagaggccattacaggtacaaaaaagccggcaaaaacgccggcttcatttgatcagtccagttgctgaacagtcttcttcacctgctcggg  <  2:392429‑M2/150‑98 (MQ=255)                                                                                                                                                    |                                                                                                                                                  GCGTTCATGCGCGCCGAGCAGCCTGGCCTGGAATTACAGCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGAGCGTCGAACAAGGCCTGCACGCCGAGCAGGA  >  NC_002947/511774‑512066

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.