New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4577865	16 (0.570)	4 (0.150)	4/236	NT	15.9%	intergenic (+30/+79)	PP_4057/glgB	membrane protein/1,4‑alpha‑glucan branching enzyme
	?	NC_002947	= 4577907	27 (1.000)					intergenic (+72/+37)	PP_4057/glgB	membrane protein/1,4‑alpha‑glucan branching enzyme

CCGATTACAGCAGTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGATTGCCGAC  >  NC_002947/4577759‑4578054                                                                                                                                                     |                                                                                                                                                    ccGATTACAGCAGTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAAc                                                                                                                                                    <  1:617925‑M2/150‑2 (MQ=255) ccGATTACAGCAGTGATGTGGATGACAATGACCTGAACGGGGTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACACGGGTCGCCGCCGGGTGTGGTGCCTGCGTAGGAAc                                                                                                                                                    <  1:377777‑M2/150‑2 (MQ=255)         agcagTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTcc                                                                                                                                            >  1:325351/1‑150 (MQ=255)         agcagTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTcc                                                                                                                                            >  1:326231/1‑150 (MQ=255)               gATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGaa                                                                                                                                      >  2:96145/1‑150 (MQ=255)                  gtgGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAgg                                                                                                                                   >  2:493214/1‑150 (MQ=255)                  gtgGATGACAATGACCTGAACGAGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAgg                                                                                                                                   <  1:207345/150‑1 (MQ=255)                      aTGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACACGGCTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGCCTCCCGCGAAAAGGCCa                                                                                                                               >  2:76283/1‑150 (MQ=255)                           aaTGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACa                                                                                                                          >  2:537907/1‑150 (MQ=255)                                 cTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAAcggg                                                                                                                                                 >  2:18179‑M2/1‑117 (MQ=255)                                 cTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAAcggg                                                                                                                                                 <  1:18179‑M2/121‑5 (MQ=255)                                         gTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACATGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAgg                                                                                                            >  2:192690/1‑150 (MQ=255)                                                   aGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCAt                                                                                                  <  1:537907/150‑1 (MQ=255)                                                       ttGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATc                                                                                              <  2:325351/150‑1 (MQ=255)                                                           ggTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAaca                                                                                          >  2:453915/1‑150 (MQ=255)                                                                              gCAGGGACGGCCCCTTCGCGGATAAACCCGCTCCTACAGGGGTCACCCACGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGGTCAACACCCCCAACGGCGGCAGGtt                                                                       >  2:217608/1‑150 (MQ=255)                                                                                  ggccggccCCTTCGCGGGTAAACCCGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAgg                                                                   <  2:617925/150‑1 (MQ=255)                                                                                    ccggccCCTTCGCGGGTAAACCCGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGc                                                                 <  2:711432/150‑1 (MQ=255)                                                                                           cTTCGCGGGTAAACCCGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGAt                                                          >  2:611659/1‑150 (MQ=255)                                                                                                        cccGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAAcgggtttacccgcgaaggggccggccctgcctaccaccgcatccgcaccccaaggctgccaatcaac                                                                                  >  2:136877‑M2/1‑46 (MQ=255)                                                                                                        cccGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAAcgggtttacccgcgaaggggccggccctgcctaccaccgcatccgcaccccaaggctgccaatcaac                                                                                  <  1:136877‑M2/113‑68 (MQ=255)                                                                                                         ccGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGtg                                            >  1:675067/1‑150 (MQ=255)                                                                                                          cGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGtgg                                           >  1:496954/1‑150 (MQ=255)                                                                                                               cTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAAcgggtttacccgcgaaggggccggccctgcctaccaccgcatccgcaccccaaggctgccaa                                                                                       >  1:93111‑M2/1‑39 (MQ=255)                                                                                                               cTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAAcgggtttacccgcgaaggggccggccctgcctaccaccgcatccgcaccccaaggctgccaa                                                                                       <  2:93111‑M2/101‑63 (MQ=255)                                                                                                               cTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGtggctggc                                      <  1:453915/150‑1 (MQ=255)                                                                                                                     gggTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTc                                <  2:496954/150‑1 (MQ=255)                                                                                                                     gggTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTc                                <  1:192690/150‑1 (MQ=255)                                                                                                                        tCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTc                             >  1:574513/1‑150 (MQ=255)                                                                                                                        tCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTc                             >  1:536728/1‑150 (MQ=255)                                                                                                                            cggcgGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTg                         <  1:690576/147‑1 (MQ=255)                                                                                                                                         gcCTGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCga            <  1:493214/150‑1 (MQ=255)                                                                                                                                           cTGCGTAGGAACGGGTCTCCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTAGTCACTGGCCACCGCCCCgaga          <  2:326231/150‑1 (MQ=255)                                                                                                                                            tGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGAt         <  1:96145/150‑1 (MQ=255)                                                                                                                                            tGCGTAGGAACGGGCCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGAt         >  2:512029/1‑150 (MQ=255)                                                                                                                                               gTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGATTGc      <  2:574513/150‑1 (MQ=255)                                                                                                                                               gTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGATTGc      <  1:160429/150‑1 (MQ=255)                                                                                                                                                   gAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGATTGCCGAc  >  2:290928/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CCGATTACAGCAGTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACACGGGTCACCGCCGGGTGCGGTGCCTGCGTAGGAACGGGTCTCCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGATTGCCGAC  >  NC_002947/4577759‑4578054

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.