New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	883834 =	11 (0.380)	4 (0.180)	4/200	2.7	49.0%	intergenic (+69/‑259)	PP_0766/PP_0767	hypothetical protein/LuxR family transcriptional regulator
	?	NC_002947	883908 =	0 (0.000)					intergenic (+143/‑185)	PP_0766/PP_0767	hypothetical protein/LuxR family transcriptional regulator

TGGGCGCAATAGGCGCGGAAAAGACTGCGACAAAAAGCAACATGGCTGATGGACAGGGGCTGGGGCGGGGGTTTGGAGAGGTATTCAGGAGGTTGATTGCCTTGCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACCGCGGAACCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/884011‑883834 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggttcacccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATGCGCAGCGTTAACGG  >  NC_002947/883908‑884038                                                                                                                                                                                                                                                                                                                       TGGGCGCAATAGGCGCGGAAAAGACTGCGACAAAAAGCAACATGGCTGATGGACAGGGGCTGGGGCGGGGGTTTGGAGAGGTATTCAGGAGGTTGATTGCCTTGCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACCGCGGAACCTGTAG                                                                                                                                                                 <  1:526242/150‑1                                                                                        GGAGGTTGATTGCCTTGCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACCGCGGAACCTGTAGGAGCGGGTTCACCCGCGAAGAG                                                                                                                                           >  1:707567/1‑85                                                                                        GGAGGTTGATTGCCTTGCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACCGCGGAACCTGTAGGAGCGGGTTCACCCGCGAAGAG                                                                                                                                           <  2:707567/85‑1                                                                                                                               CCGCTCCTACCGCGGAACCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCC                                                                                     <  1:552592/100‑1                                                                                                                               CCGCTCCTACCGCGGAACCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCC                                                                                     >  2:552592/1‑100                                                                                                                                   TCCTACCGCGGAACCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCC                                                                                                                    <  1:65981/65‑1                                                                                                                                   TCCTACCGCGGAACCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCC                                                                                                                    >  2:65981/1‑65                                                                                                                                                         GCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGC                                                                 <  1:337833/94‑1                                                                                                                                                         GCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGC                                                                 >  2:337833/1‑94                                                                                                                                                         GCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCT                                                                                                                   <  1:68158/44‑1                                                                                                                                                         GCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCT                                                                                                                   >  2:68158/1‑44                                                                                                                                                                 ACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCT                                       >  1:224630/1‑112                                                                                                                                                                 ACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCT                                       <  2:224630/112‑1                                                                                                                                                                   CCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTC                                                         >  2:73558/1‑92                                                                                                                                                                   CCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTC                                                         <  1:73558/92‑1                                                                                                                                                                             GCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATGCGCAGCGTTAACGG  <  2:368190/137‑1                                                                                                                                                                             GCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATGCGCAGCGTTAACGG  >  1:368190/1‑137                                                                                                                                                                                                                                                                                                                       TGGGCGCAATAGGCGCGGAAAAGACTGCGACAAAAAGCAACATGGCTGATGGACAGGGGCTGGGGCGGGGGTTTGGAGAGGTATTCAGGAGGTTGATTGCCTTGCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACCGCGGAACCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/884011‑883834 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggttcacccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATGCGCAGCGTTAACGG  >  NC_002947/883908‑884038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.