New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	883834 =	11 (0.380)	4 (0.180)	4/200	2.7	49.0%	intergenic (+69/‑259)	PP_0766/PP_0767	hypothetical protein/LuxR family transcriptional regulator
	?	NC_002947	883908 =	0 (0.000)					intergenic (+143/‑185)	PP_0766/PP_0767	hypothetical protein/LuxR family transcriptional regulator

CGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGG  >  NC_002947/883688‑883906                                                                                                                                                   |                                                                         cGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCg                                                                       >  2:361826/1‑150 (MQ=255)   tGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGc                                                                     <  2:625637/150‑1 (MQ=255)               cGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGt                                                         <  1:361826/150‑1 (MQ=255)                ccgttaacgctgcgcatttgaagatgatgggcgcaataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGc                                                                     >  1:368190‑M1/132‑137 (MQ=255)                ccgttaacgctgcgcatttgaagatgatgggcgcaataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGc                                                                     <  2:368190‑M1/6‑1 (MQ=255)                   ttCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAAc                                                     <  1:650767/150‑1 (MQ=255)                       gTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGc                                                 <  2:483188/150‑1 (MQ=255)                        ggCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCt                                                <  2:347612/149‑1 (MQ=255)                         gCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTc                                               <  2:565168/150‑1 (MQ=255)                         gCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTc                                               <  2:497144/150‑1 (MQ=255)                         gCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCCTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTc                                               <  1:232999/150‑1 (MQ=255)                                                     aggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGt                                                         <  2:224630‑M1/18‑1 (MQ=255)                                                     aggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGt                                                         >  1:224630‑M1/95‑112 (MQ=255)                                                                tCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAaga        >  2:314730/1‑150 (MQ=255)                                                                      aTTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCgg  <  1:314730/150‑1 (MQ=255)                                                                       gacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCgg                                                           <  1:73558‑M1/16‑1 (MQ=255)                                                                       gacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCgg                                                           >  2:73558‑M1/77‑92 (MQ=255)                                                                               gcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAACCCGc                                                 >  2:337833‑M1/69‑94 (MQ=255)                                                                               gcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAACCCGc                                                 <  1:337833‑M1/26‑1 (MQ=255)                                                                                                   gggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCgg                       <  1:552592‑M1/52‑1 (MQ=255)                                                                                                   gggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCgg                       >  2:552592‑M1/49‑100 (MQ=255)                                                                                                                                 aggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAACCCGc                                                 <  1:68158‑M1/26‑1 (MQ=255)                                                                                                                                 aggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAACCCGc                                                 >  2:68158‑M1/19‑44 (MQ=255)                                                                                                                                  ggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGa                           <  1:65981‑M1/48‑1 (MQ=255)                                                                                                                                  ggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGa                           >  2:65981‑M1/18‑65 (MQ=255)                                                                                                                                                   |                                                                         CGTGCCTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGG  >  NC_002947/883688‑883906

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.