| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3494626 | 27 (1.170) | 3 (0.140) | 3/238 | NT | 11.2% | coding (102/483 nt) | PP_3098 | hypothetical protein |
| ? | NC_002947 | = 3494655 | 22 (1.000) | coding (73/483 nt) | PP_3098 | hypothetical protein | |||||
TCGAGCACGCTGCGGCTGATGAAGTCCGGCATGCCGTATTCAAGGATGGAACCACCGAGCTGGCTGAAACCGTCGAGCTCTTCGGCGACCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3494474‑3494626‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccGAGCCCGCAGCGCAGCGCACCTGCTCGCTGGCCGAGTACAAGGCCAGCATCGTCCGCGACCTCGAAGTCCTGGTGAACACCCGCCAGTCCCTGGTCGCCGAAGAGCTCGACGGTTTCAGCCAGCTCGGTGGTTCCATCCTTGAATACG < NC_002947/3494655‑3494508 TCGAGCACGCTGCGGCTGATGAAGTCCGGCATGCCGTATTCAAGGATGGAACCACCGAGCTGGCTGAAACCGTCGAGCTCTTCGGCGACCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCG < 1:477618/150‑1TCGAGCACGCTGCGGCTGATGAAGTCCGGCATGCCGTATTCAAGGATGGAACCACCGAGCTGGCTGAAACCGTCGAGCTCTTCGGCGACCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCG < 2:259982/150‑1TCGACCACGCTGTGGCTGATGAAGTCCGGCATGCCGTATTCAAGGATGGAACCACCGAGCTGGCTGAAACCGTCGAGCTCTTCGGCGACCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGCACGATGCTGGCCTTGTACTCG < 1:179307/150‑1 AGGATGGAACCACCGAGCTGGCTGAAACCGTCGAGCTCTTCGGCGACCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCCGAGCCCGCAGCGCAGCGCACCTGCTCGCTGGCCGAGTAC < 1:83155/150‑1 GTCGAGCTCTTCGGCGACCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGC < 1:144887/81‑1 GTCGAGCTCTTCGGCGACCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGC > 2:144887/1‑81 TGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCCGAGCCCGCAGCGCAGCGCACCTGCTCGCTGGCCGA < 1:133211/92‑1 TGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCCGAGCCCGCAGCGCAGCGCACCTGCTCGCTGGCCGA > 2:133211/1‑92 GGCCGAGCCCGCAGCGCAGCGCACCTGCTCGCTGGCCGAGTACAAGGCCAGCATCGTCCGCGACCTCGAAGTCCTGGTGAACACCCGCCAGTCCCTGGTCGCCGAAGAGCTCGACGGTTTCAGCCAGCTCGGTGGTTCCATCCTTGAATA < 2:500304/150‑1 tCGAGCCCGCAGCGCAGCGCACCTGCTCGCTGGCCGAGTACAAGGCCAGCATCGTCCGCGACCTCGAAGTCCTGGTGAACACCCGCCAGTCCCTGGTCGCCGAAGAGCTCGACGGTTTCAGCCAGCTCGGTGGTTCCATCCTTGAATACG < 1:462927/149‑1 TCGAGCACGCTGCGGCTGATGAAGTCCGGCATGCCGTATTCAAGGATGGAACCACCGAGCTGGCTGAAACCGTCGAGCTCTTCGGCGACCAGGGACTGGCGGGTGTTCACCAGGACTTCGAGGTCGCGGACGATGCTGGCCTTGTACTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3494474‑3494626‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccGAGCCCGCAGCGCAGCGCACCTGCTCGCTGGCCGAGTACAAGGCCAGCATCGTCCGCGACCTCGAAGTCCTGGTGAACACCCGCCAGTCCCTGGTCGCCGAAGAGCTCGACGGTTTCAGCCAGCTCGGTGGTTCCATCCTTGAATACG < NC_002947/3494655‑3494508 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |