| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4667658 = | 38 (1.640) | 4 (0.180) | 4/242 | NT | 10.7% | coding (1378/1854 nt) | nuoL | NADH‑quinone oxidoreductase subunit L |
| ? | NC_002947 | 4667708 = | 30 (1.340) | coding (1428/1854 nt) | nuoL | NADH‑quinone oxidoreductase subunit L | |||||
AGCAGGATACCGGCGATGGCGATGGCACCCGAGGTGATCTCCAGCGCGTGCTTGGCTTCGCCACCGGCATGGCCGGCGCTTTCCGGCAGCACACCGGCCAGCGGCGGGGTGATCCAGGCGCCGACGAAAGTCGACAGCACGATCAGCACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4667809‑4667658‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTC > NC_002947/4667708‑4667855 AGCAGGATACCGGCGATGGCGATGGCACCCGAGGTGATCTCCAGCGCGTGCTTGGCTTCGCCACCGGCATGGCCGGCGCTTTCCGGCAGCACACCGGCCAGCGGCGGGGTGATCCAGGCGCCGACGAAAGTCGACAGCCCGGTCAGCACc > 2:223231/1‑149AGCAGGATACCGGCGATGGCGATGGCACCCGAGGTGATCTCCAGCGCGTGCTTGGCTTCGCCACCGGCATGGCCGGCGCTTTCCGGCAGCACACCGGCCAGCGGCGGGGTGATCCAGGCGCCGACGAAAGTCGACAGCACGATCAGCACG > 1:595585/1‑150 GGGGTGATCCAGGCGCCGACGAAAGTCGACAGCACGATCAGCACGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTG > 1:33549/1‑150 ATCCAGGCGCCGACGAAAGTCGACAGCACGATCAGCACGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTG > 1:613321/1‑102 ATCCAGGCGCCGACGAAAGTCGACAGCACGATCAGCACGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTG < 2:613321/102‑1 GAAAGTCGACAGCACGATCAGCACGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGG < 2:33549/150‑1 CCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGATGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTC < 1:354128/150‑1 AGCAGGATACCGGCGATGGCGATGGCACCCGAGGTGATCTCCAGCGCGTGCTTGGCTTCGCCACCGGCATGGCCGGCGCTTTCCGGCAGCACACCGGCCAGCGGCGGGGTGATCCAGGCGCCGACGAAAGTCGACAGCACGATCAGCACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4667809‑4667658‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTC > NC_002947/4667708‑4667855 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |