New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5306259 =	18 (0.780)	3 (0.130)	3/242	NT	14.1%	coding (1041/3483 nt)	recC	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
	?	NC_002947	5306292 =	19 (0.850)					coding (1008/3483 nt)	recC	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit

TACCAGGGCGTGTTCAGCGACGGCCGCATCGACCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5306294‑5306259 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTT  >  NC_002947/5306292‑5306438                                                                                                                                                                                         TACCAGGGCGTGTTCAGCGACGGCCGCATCGACCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTCGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTAGTCCAGTTG                                   >  2:20583/1‑150    CAGGGCGTGTTCAGCGACGGCCGCATCGACCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGG                                                                   >  1:565319/1‑115    CAGGGCGTGTTCAGCGACGGCCGCATCGACCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGG                                                                   <  2:565319/115‑1                                  CTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTT  <  1:366156/150‑1                                                                                                                                                                                         TACCAGGGCGTGTTCAGCGACGGCCGCATCGACCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5306294‑5306259 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTT  >  NC_002947/5306292‑5306438

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.