New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 383563 = | 22 (0.950) | 3 (0.130) | 3/246 | NT | 10.8% | coding (38/1938 nt) | PP_0320 | methyl‑accepting chemotaxis transducer |
? | NC_002947 | 383593 = | 28 (1.230) | coding (68/1938 nt) | PP_0320 | methyl‑accepting chemotaxis transducer |
TGCTGGCTGGCAGGGCAGTGTCGACCAGGTAGCGGTCGGTGAGGCGGTTCAGCGCCACAGTGAAGATAATGACCACCACCAGGATGCTCGCCAGCA‑GGGCAGCGCCCATGCTGGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/383679‑383563 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaGCATCCTGGTGGTGGTCATTATCTTCACTGTGG > NC_002947/383593‑383625 TGCTGGCTGGCAGGGCAGTGTCGACCAGGTAGCGGTCGGTGAGGCGGTTCAGCGCCACAGTGAAGATAATGACCACCACCAGGATGCTCACCAGCATGGGC‑GCTGCCCTGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGG < 2:405190/150‑1 GCCAGCA‑GGGCAGCGCCCATGCTGGTGAGCATCCTGGTGGTGGTCATTATCT > 1:173898/1‑52 GCCAGCA‑GGGCAGCGCCCATGCTGGTGAGCATCCTGGTGGTGGTCATTATCT < 2:173898/52‑1 TGCTGGCTGGCAGGGCAGTGTCGACCAGGTAGCGGTCGGTGAGGCGGTTCAGCGCCACAGTGAAGATAATGACCACCACCAGGATGCTCGCCAGCA‑GGGCAGCGCCCATGCTGGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/383679‑383563 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaGCATCCTGGTGGTGGTCATTATCTTCACTGTGG > NC_002947/383593‑383625 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |