| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 383563 = | 22 (0.950) | 3 (0.130) | 3/246 | NT | 10.8% | coding (38/1938 nt) | PP_0320 | methyl‑accepting chemotaxis transducer |
| ? | NC_002947 | 383593 = | 28 (1.230) | coding (68/1938 nt) | PP_0320 | methyl‑accepting chemotaxis transducer | |||||
TGCTGGCTGGCAGGGCAGTGTCGACCAGGTAGCGGTCGGTGAGGCGGTTCAGCGCCACAGTGAAGATAATGACCACCACCAGGATGCTCGCCAGCA‑GGGCAGCGCCCATGCTGGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/383679‑383563‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaGCATCCTGGTGGTGGTCATTATCTTCACTGTGG > NC_002947/383593‑383625 TGCTGGCTGGCAGGGCAGTGTCGACCAGGTAGCGGTCGGTGAGGCGGTTCAGCGCCACAGTGAAGATAATGACCACCACCAGGATGCTCACCAGCATGGGC‑GCTGCCCTGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGG < 2:405190/150‑1 GCCAGCA‑GGGCAGCGCCCATGCTGGTGAGCATCCTGGTGGTGGTCATTATCT > 1:173898/1‑52 GCCAGCA‑GGGCAGCGCCCATGCTGGTGAGCATCCTGGTGGTGGTCATTATCT < 2:173898/52‑1 TGCTGGCTGGCAGGGCAGTGTCGACCAGGTAGCGGTCGGTGAGGCGGTTCAGCGCCACAGTGAAGATAATGACCACCACCAGGATGCTCGCCAGCA‑GGGCAGCGCCCATGCTGGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/383679‑383563‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaGCATCCTGGTGGTGGTCATTATCTTCACTGTGG > NC_002947/383593‑383625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |