| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 383563 = | 22 (0.950) | 3 (0.130) | 3/246 | NT | 10.8% | coding (38/1938 nt) | PP_0320 | methyl‑accepting chemotaxis transducer |
| ? | NC_002947 | 383593 = | 28 (1.230) | coding (68/1938 nt) | PP_0320 | methyl‑accepting chemotaxis transducer | |||||
TACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTGCCAGCCAGCATCGAGGCTATCCGCAATGACATCGAGCGCATG > NC_002947/383431‑383711 | tACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATATACTTTCAGCCAAAACATAATGTGCCAGGAGGAGGGGCAGGCTTATCTGGCGTAAGACCATCCAGTTGTAATTGATCACCAGCATGGGCGCTg < 2:70243/150‑1 (MQ=255)tACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTg < 1:335625/150‑1 (MQ=255) gTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCc‑tgc > 2:182646/1‑150 (MQ=255) cTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCt < 2:29060/150‑1 (MQ=255) ttCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTCTGCTCGAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCtg > 1:494366/1‑150 (MQ=255) tCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCtgg < 1:87326/150‑1 (MQ=255) cAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCtggt < 1:182646/150‑1 (MQ=255) cTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCtggtggtgg > 1:22686/1‑148 (MQ=255) cTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCtggtggtgg < 2:22686/148‑1 (MQ=255) gCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACtgt > 1:182799/1‑147 (MQ=255) gCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACtgt < 2:182799/147‑1 (MQ=255) aaGTGTATACACTTTCCGCAAAACAATAAGGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGgcgc < 2:217940/150‑1 (MQ=255) tgtATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGa < 1:331811/150‑1 (MQ=255) tataCACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAAc > 1:544156/1‑150 (MQ=255) aataatGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCt > 1:432908/1‑127 (MQ=255) aataatGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCt < 2:432908/127‑1 (MQ=255) ggCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTgcca > 2:243509/1‑150 (MQ=255) ggCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTgcca < 2:494366/150‑1 (MQ=255) ccacagtgaagataatgaccaccaccaggatgcTCGCCAGCAGGGCAGC‑GCCCATGCTGGTGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTGCCAGCCAGCa < 2:405190‑M1/117‑1 (MQ=255) cTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTGCCAGCCAGCATCGa < 1:243509/150‑1 (MQ=255) agataatgaccaccaccaggatgcTCACCAGCATGGGCGCTGCCC‑TGCTGGc < 2:173898‑M1/28‑1 (MQ=255) agataatgaccaccaccaggatgcTCACCAGCATGGGCGCTGCCC‑TGCTGGc > 1:173898‑M1/25‑52 (MQ=255) aTCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACtgtg < 2:211928/78‑1 (MQ=255) aTCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACtgtg > 1:211928/1‑78 (MQ=255) gCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTGCCAGCCAGCATCGAGGCTATCCGCAATGACATCGa < 2:544156/150‑1 (MQ=255) tGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGCTACTTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTGCCAGCCAGCATCGAGGCTATCCGCAATGACATCGAGCGCa < 1:442149/150‑1 (MQ=255) aTCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTGCCAGCCAGCATCGAGGCTATCCGCAATGACATCGAGCGCATg > 2:392127/1‑150 (MQ=255) | TACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTGCCAGCCAGCATCGAGGCTATCCGCAATGACATCGAGCGCATG > NC_002947/383431‑383711 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |