New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	383563 =	22 (0.950)	3 (0.130)	3/246	NT	10.8%	coding (38/1938 nt)	PP_0320	methyl‑accepting chemotaxis transducer
	?	NC_002947	383593 =	28 (1.230)					coding (68/1938 nt)	PP_0320	methyl‑accepting chemotaxis transducer

CTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTGCCAGCCAGCATCGAGGCTATCCGCAATGACATCGAGCGCATGCTGGGCCAACCGTTG  >  NC_002947/383450‑383726                                                                                                                                                 |                                                                                                                                      cTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCt                                                                                                                                 <  2:29060/150‑1 (MQ=255)  ttCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTCTGCTCGAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCtg                                                                                                                                >  1:494366/1‑150 (MQ=255)   tCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCtgg                                                                                                                               <  1:87326/150‑1 (MQ=255)    cAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCtggt                                                                                                                              <  1:182646/150‑1 (MQ=255)           cTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCtggtggtgg                                                                                                                         <  2:22686/148‑1 (MQ=255)           cTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCtggtggtgg                                                                                                                         >  1:22686/1‑148 (MQ=255)                            tgctggctggcagggcagtgtcgaccaggtagcggtcggtgaggcggttcagcgccacagtgaagataatgaccaccaccaggatgctcaccagcatgggcgctgccctgctggcgaGCATCCTGGTGGTGGTCATTATCTTCACTGTgg                                                                                                       <  2:405190‑M2/33‑1 (MQ=255)                            gCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACtgt                                                                                                         >  1:182799/1‑147 (MQ=255)                            gCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACtgt                                                                                                         <  2:182799/147‑1 (MQ=255)                              aaGTGTATACACTTTCCGCAAAACAATAAGGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGgcgc                                                                                                    <  2:217940/150‑1 (MQ=255)                                 tgtATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGa                                                                                                 <  1:331811/150‑1 (MQ=255)                                   tataCACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAAc                                                                                               >  1:544156/1‑150 (MQ=255)                                                      aataatGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCt                                                                                                   <  2:432908/127‑1 (MQ=255)                                                      aataatGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCt                                                                                                   >  1:432908/1‑127 (MQ=255)                                                                          ggCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTgcca                                                        <  2:494366/150‑1 (MQ=255)                                                                          ggCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTgcca                                                        >  2:243509/1‑150 (MQ=255)                                                                                 ccacagtgaagataatgaccaccaccaggatgcTCGCCAGCAGGGCAGC‑GCCCATGCTGGTGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTGCCAGCCAGCa                                                 <  2:405190‑M1/117‑1 (MQ=255)                                                                                     cTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTGCCAGCCAGCATCGa                                             <  1:243509/150‑1 (MQ=255)                                                                                                  aTCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACtgtg                                                                                                        >  1:211928/1‑78 (MQ=255)                                                                                                  aTCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACtgtg                                                                                                        <  2:211928/78‑1 (MQ=255)                                                                                                          gCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTGCCAGCCAGCATCGAGGCTATCCGCAATGACATCGa                        <  2:544156/150‑1 (MQ=255)                                                                                                               tGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGCTACTTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTGCCAGCCAGCATCGAGGCTATCCGCAATGACATCGAGCGCa                   <  1:442149/150‑1 (MQ=255)                                                                                                                 aTCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTGCCAGCCAGCATCGAGGCTATCCGCAATGACATCGAGCGCATg                 >  2:392127/1‑150 (MQ=255)                                                                                                                    aCCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACActgccct                                                            <  2:241983/104‑1 (MQ=255)                                                                                                                    aCCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACActgccct                                                            >  1:241983/1‑104 (MQ=255)                                                                                                                    aCCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTGCCAGCCAGCATCGAGGCTATCCGCAATGACATCGAGCGCATGCTg              >  2:427806/1‑150 (MQ=255)                                                                                                                     gccagcagggcagcgcccatgctggtgaGCATCCTGGTGGTGGTCATTATCt                                                                                                                <  2:173898‑M2/24‑1 (MQ=255)                                                                                                                     gccagcagggcagcgcccatgctggtgaGCATCCTGGTGGTGGTCATTATCt                                                                                                                >  1:173898‑M2/29‑52 (MQ=255)                                                                                                                               cgcTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTGCCAGCCAGCATCGAGGCTATCCGCAATGACATCGAGCGCATGCTGGGCCAACCgtt   <  1:427806/150‑1 (MQ=255)                                                                                                                                gcTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTGCCAGCCAGCATCGAGGCTATCCGCAATGACATCGAGCGCATGCTGGGCCAACCgttg  >  1:430770/1‑150 (MQ=255)                                                                                                                                        tgctgGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACActgccctgcc                                                         >  2:314971/1‑88 (MQ=255)                                                                                                                                        tgctgGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACActgccctgcc                                                         <  1:314971/88‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                      CTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAGCATGGGCGCTGCCC‑TGCTGGCGAGCATCCTGGTGGTGGTCATTATCTTCACTGTGGCGCTGAACCGCCTCACCGACCGCTACCTGGTCGACACTGCCCTGCCAGCCAGCATCGAGGCTATCCGCAATGACATCGAGCGCATGCTGGGCCAACCGTTG  >  NC_002947/383450‑383726

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.