New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1263652 =	25 (1.080)	4 (0.180)	4/242	NT	15.3%	coding (761/1659 nt)	PP_1105	ATP‑dependent DNA ligase
	?	NC_002947	1263688 =	20 (0.890)					coding (725/1659 nt)	PP_1105	ATP‑dependent DNA ligase

GTGGGATGGCATTCGGGCGCAAGTGGTGAAGCGCGATGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1263693‑1263652 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaTCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAGGGCTGACCGCCACGCTGGTTGTGTTCATCGGC  >  NC_002947/1263688‑1263818                                                                                                                                                                               GTGGGATGGCATTCGGGCGCAAGTGGTGAAGCGCGATGGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAG                                  >  1:440985/1‑141 GTGGGATGGCATTCGGGCGCAAGTGGTGAAGCGCGATGGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAG                                  <  2:440985/141‑1      ATGGCATTCGGGCGCAAGTGGTGAAGCGCGATGGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAGGGCTGACCGCCACG                    >  2:519550/1‑150                        TGGTGAAGCGCGATGGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAGGGCTGACCGCCACGCTGGTTGTGTTCATCGGC  <  1:519550/150‑1                                                                                                                                                                               GTGGGATGGCATTCGGGCGCAAGTGGTGAAGCGCGATGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1263693‑1263652 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaTCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAGGGCTGACCGCCACGCTGGTTGTGTTCATCGGC  >  NC_002947/1263688‑1263818

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.