New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1263652 = | 25 (1.080) | 4 (0.180) | 4/242 | NT | 15.3% | coding (761/1659 nt) | PP_1105 | ATP‑dependent DNA ligase |
? | NC_002947 | 1263688 = | 20 (0.890) | coding (725/1659 nt) | PP_1105 | ATP‑dependent DNA ligase |
AGACCAGGATCTCGCCATCGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAGGGCTGACCGCCACGCTGGTTGTGTTCATCGGCGGACTCTGGGG > NC_002947/1263539‑1263829 | cgtggcggtcagccctacccattcttcctggcccatccgctgcaagtgtccagcgatcagttcgataccctgctcggaccaccaagcgattggcaaatcgaatggaagtgggaTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCAt > 2:519550‑M1/114‑150 (MQ=255) aGACCAGGATCTCGCCATCGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCAt > 1:338299/1‑150 (MQ=255) aCCAGGATCTCGCCATCGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATcc < 2:297852/150‑1 (MQ=255) cAGGATCTCGCCATCGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACAACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCa > 1:113498/1‑150 (MQ=255) ctacccattcttcctggcccatccgctgcaagtgtccagcgatcagttcgataccctgctcggaccaccaagcgattggcaaatcgaatggaagtgggaTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCAc < 2:440985‑M1/42‑1 (MQ=255) ctacccattcttcctggcccatccgctgcaagtgtccagcgatcagttcgataccctgctcggaccaccaagcgattggcaaatcgaatggaagtgggaTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCAc > 1:440985‑M1/100‑141 (MQ=255) aTCGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGAt < 2:318216/150‑1 (MQ=255) cGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGAttt > 1:152251/1‑150 (MQ=255) gCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTc > 2:505837/1‑150 (MQ=255) cATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACt < 2:1828/150‑1 (MQ=255) cATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACt > 2:310941/1‑150 (MQ=255) cgcTCGGTAACTTGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCCATTATGCCCGGGTGCGATCCGCTTTCCATTCGATTTGCCACTCGCTTGGTGGTCCGAGCAGTGTATCGAACTGATCGCTGGACACTTGc < 1:505837/150‑1 (MQ=255) gTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGa > 1:409956/1‑150 (MQ=255) aCCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATgg < 1:310941/150‑1 (MQ=255) cAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGc < 2:409956/150‑1 (MQ=255) gccgcGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTg < 2:365623/121‑1 (MQ=255) gccgcGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTg > 1:365623/1‑121 (MQ=255) cgcgTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATg < 1:411002/150‑1 (MQ=255) acCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAGGGCTGa > 2:28322/1‑150 (MQ=255) gtgggatggcattcgggcgcaagtggtgaagcgcgatggccaTCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAg > 1:440985‑M2/43‑141 (MQ=255) gtgggatggcattcgggcgcaagtggtgaagcgcgatggccaTCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAg < 2:440985‑M2/99‑1 (MQ=255) atggcattcgggcgcaagtggtgaagcgcgatggccaTCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAGGGCTGACCGCCACg > 2:519550‑M2/38‑150 (MQ=255) aTCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATgg < 2:247877/112‑1 (MQ=255) aTCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATgg > 1:247877/1‑112 (MQ=255) aTCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAGGGCTGACCGCCACGCTGGtt < 2:113498/150‑1 (MQ=255) ccacTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAGGGCTGACCGCCACGCTGGTTGTGTTCATcgg > 1:200031/1‑150 (MQ=255) tggtgaagcgcgatggccaTCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAGGGCTGACCGCCACGCTGGTTGTGTTCATcggc < 1:519550‑M2/131‑1 (MQ=255) cacTTGCGCCCGAATGACATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAGGGCTGAc < 2:267369/125‑1 (MQ=255) cacTTGCGCCCGAATGACATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAGGGCTGAc > 1:267369/1‑125 (MQ=255) gcCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTATGGCTGACCGCCACGCTGGATGTGTTCATAGGCGGActct > 2:227632/1‑150 (MQ=255) cGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATTTGTAGGGCTGACCGCCACGCTGGTTGTGTTCATCGGCGGACTCTggg < 2:152251/150‑1 (MQ=255) cGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAGGGCTGACCGCCACGCTGGTTGTGTTCATCGGCGGACTCTggg < 2:338299/150‑1 (MQ=255) gAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAGGGCTGACCGCCACGCTGGTTGTGTTCATCGGCGGACTCTgggg < 2:200031/150‑1 (MQ=255) tCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAGGGCt < 2:479407/103‑1 (MQ=255) tCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAGGGCt > 1:479407/1‑103 (MQ=255) | AGACCAGGATCTCGCCATCGAGCACCACGCCATCGGGCAACGTCTGTGCCAGGCCATGCAGTTCGGGGAAGCGCTCGGTAACCAGTTCTTCGCCGCGTGACCACACCCACAGCTGGCCATCGCGCTTCACCACTTGCGCCCGAATGCCATCCCACTTCCATTCGATTTGCCAATCGCTTGGTGGTCCGAGCAGGGTATCGAACTGATCGCTGGACACTTGCAGCGGATGGGCCAGGAAGAATGGGTAGGGCTGACCGCCACGCTGGTTGTGTTCATCGGCGGACTCTGGGG > NC_002947/1263539‑1263829 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |