New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1968086	14 (0.610)	4 (0.190)	4/224	NT	22.5%	intergenic (‑54/+104)	yciK/gph	putative oxidoreductase/phosphoglycolate phosphatase
	?	NC_002947	= 1968145	15 (0.720)					intergenic (‑113/+45)	yciK/gph	putative oxidoreductase/phosphoglycolate phosphatase

CCACGGCCGGCACCGGTAACCAGGATGACCCGGCCTTGCAGCAGGTCGGGGCGGGCGGTGTAGTCGAACATGGTTCTGTCCTTCGAGTTCGTGTGGGCGGCCTGGGCCTATCGTAGGAGCGGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1967962‑1968086 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggttCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTACGATAGGCCCAGGCCGCCCACACGAACTCGAAGGACAGAACCATGTTCGACTACACCGCCCGCCCCGACCTG  <  NC_002947/1968145‑1968003                                                                                                                                                                                                                                                                              CCACGGCCGGCACCGGTAACCAGGATGACCCGGCCTTGCAGCAGGTCGGGGCGGGCGGTGTAGTCGAACATGGTTCTGTCCTTCGAGTTCGTGTGGGCGGCCTGGGCCTATCGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGAC                                                                                                                        >  2:558660/1‑150                                                   GCGGGCGGTGTAGTCGAACATGGTTCTGTCCTTCGAGTTCGTGTGGGCGGCCTGGGCCTATCGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGG                                                                                         >  1:232376/1‑131                                                   GCGGGCGGTGTAGTCGAACATGGTTCTGTCCTTCGAGTTCGTGTGGGCGGCCTGGGCCTATCGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGG                                                                                         <  2:232376/131‑1                                                     GGGCGGTGTAGTCGAACATGGTTCTGTCCTTCGAGTTCGTGTGGGCGGCCTGGGCCTATCGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTACGATAG                                                                    <  1:558660/150‑1                                                                                                                       GCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTACGATAGGCCCAGGCCGCCCACACGAACTCGAAGGACAGAACCATGTTCGACTACACCGCCCGCCCCGGCCTt  >  2:470201/1‑149                                                                                                                           GTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTA                                                                          >  1:584268/1‑74                                                                                                                           GTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTA                                                                          <  2:584268/74‑1                                                                                                                                                                                                                                                                              CCACGGCCGGCACCGGTAACCAGGATGACCCGGCCTTGCAGCAGGTCGGGGCGGGCGGTGTAGTCGAACATGGTTCTGTCCTTCGAGTTCGTGTGGGCGGCCTGGGCCTATCGTAGGAGCGGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1967962‑1968086 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggttCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTACGATAGGCCCAGGCCGCCCACACGAACTCGAAGGACAGAACCATGTTCGACTACACCGCCCGCCCCGACCTG  <  NC_002947/1968145‑1968003

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.