New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5480444	26 (1.120)	3 (0.140)	3/236	NT	10.1%	coding (920/993 nt)	prmA	ribosomal protein L11 methyltransferase
	?	NC_002947	= 5480514	29 (1.330)					coding (990/993 nt)	prmA	ribosomal protein L11 methyltransferase

TCCGGCCTGGTTCGCCCAGGTGGCCTGCTGGCGCTTTCGGGCATCCTCGCCGAGCAAGGTGAAGACGTGGCCGCCGCTTATGCCGCCGACTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGACCGACAGTTTCGTCACCCAGTGCCCGCATTGCCAGACCAGCTTTCGCGTCACCCACCACCAGTTGGGCGTGGCCCGTGGCGTGGTGCGCTGCGGTCACTG  >  NC_002947/5480365‑5480663                                                                                                                                                      |                                                                                                                                                      tCCGGCCTGGTTCGCCCAGGTGGCCTGCTGGCGCTTTCGGGCATCCTCGCCGAGCAAGGTGAAGACGTGGCCGCCGCTTATGCCGCCGACTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGc                                                                                                                                                       <  2:460738/150‑1 (MQ=255) gccGGCCTGGTTCGCCCAGGTGGCCTGCTGGCGCTTTCGGGCATCCTCGCCGAGCAAGGTGAAGACGTGGCCGCCGCTTATGCCGCCGACTTTGAACTGGCCCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGc                                                                                                                                                       <  1:347560/149‑1 (MQ=255)    ggCCTGGTTCGCCCAGGTGGCCTGCTGGCGCTTTCGGGCATCCTCGCCGAGCAAGGTGAAGACGTGGCCGCCGCTTATGCCGCCGACTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCtaa                                                                                                                                                    <  1:545985‑M2/150‑4 (MQ=255)                       gCCTGCTGGCGCTTTCGGGCATCCTCGCCGAGCAAGGTGAAGACGTGGCCGCCGCTTATGCCGCCGACTTTGAACTGGACCCGATCGTCGTGCTCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACtttt                                                                                                                                 <  2:545985/150‑1 (MQ=255)                         ctgctgGCGCTTTCGGGCATCCTCGCCGAGCAAGGTGAAGACGTGGCCGCCGCTTATGCCGCCGACTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGGTAAGCGGGCCTAGAATACTTTTCt                                                                                                                               >  1:283960/1‑150 (MQ=255)                         ctgctgGCGCTTTCGGGCATCCTCGCCGAGCAAGGTGAAGACGTGGCCGCCGCTTATGCCGCCGACTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCt                                                                                                                               >  2:30505/1‑150 (MQ=255)                                   tttCGGGCATCCTCGCCGAGCAAGGTGAAGACGTGGCCGCCGCTTATGCCGCCGACTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTcc                                                                                                                     >  2:480785/1‑150 (MQ=255)                                         gCATCCTCGCCGAGCAAGGTGAAGACGTGGCCGCCGCTTATGCCGCCGACTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATc                                                                                                               <  2:365538/150‑1 (MQ=255)                                          cATCCTCGCCGAGCAAGGTGAAGACGTGGCCGCCGCTTATGCCGCCGACTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTg                                                                                                                              <  2:65059/134‑1 (MQ=255)                                          cATCCTCGCCGAGCAAGGTGAAGACGTGGCCGCCGCTTATGCCGCCGACTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTg                                                                                                                              >  1:65059/1‑134 (MQ=255)                                             ccTCGCCGAGCAAGGTGAAGACGTGGCCGCCGCTTATGCCGCCGACTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATcgccg                                                                                                           >  2:590037/1‑150 (MQ=255)                                                    gAGCAAGGTGAAGACGTGGCCGCCGCTTATGCCGCCGACTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCGTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGAcc                                                                                                    >  1:600594/1‑150 (MQ=255)                                                    gAGCAAGGTGAAGACGTGGCCGCCGCTTATGCCGCCGACTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGAcc                                                                                                    <  1:590037/150‑1 (MQ=255)                                                            tGAAGACGTGGCCGCCGCTTATGCCGCCGACTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCtaagcggcggccacgtcttcaccttgctcggcgaggatgcccgaaagcgccagcaggcc                                                                                            <  1:142631‑M2/150‑60 (MQ=255)                                                                gACGTGGCCGCCGCTTATGCCGCCGACTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATcgcc                                                                                                            <  2:516053/130‑1 (MQ=255)                                                                gACGTGGCCGCCGCTTATGCCGCCGACTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATcgcc                                                                                                            >  1:516053/1‑130 (MQ=255)                                                                        cgccgcTTATGCCGCCGACTTTGAACTGTACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGACCGACAGTTTCGTCACCCAGTg                                                                                >  1:544994/1‑150 (MQ=255)                                                                         gccgcTTATGCCGCCGACTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCtaagcggcggccacgtcttcaccttgctcggcgaggatgcccgaaagcgccagcaggccacctgggcgaacc                                                                               <  1:13845‑M2/150‑73 (MQ=255)                                                                         gccgcTTATGCCGCCGACTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGACCGACAGTTTCGTCACCCAGTGc                                                                               >  2:502882/1‑150 (MQ=255)                                                                                       cgACTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGACCGACAGTTTCGTCACCCAGTGCCCGCATTGCCAGAc                                                                 <  2:217788/150‑1 (MQ=255)                                                                                       cgACTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGACCGACAGTTTCGTCACCCAGTGCCCGCATTGCCAGAc                                                                 >  1:525861/1‑150 (MQ=255)                                                                                         aCTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGACCGACAGTTTCGTCACCCAGTGCCCGCATTGCCAGACCa                                                               >  2:562652/1‑150 (MQ=255)                                                                                          cTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGACCGACAGTTTCGTCACCCAGTGCCCGCATTGCCAGACCAg                                                              <  1:502882/150‑1 (MQ=255)                                                                                           tttGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGACCGACAGTTTCGTCACCCAGTGCCCGCATTGCCAGACCAGc                                                             >  2:487459/1‑150 (MQ=255)                                                                                              gAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGACCGACAGTTTCGTCACCCAGTGCCCGCATTGCCAGACCAGCttt                                                          <  1:562652/150‑1 (MQ=255)                                                                                               aaCTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGACCGACAGTTTCGTCACCCAGTGCCCGCATTGCCAGACCAGCTTTc                                                         <  1:480785/150‑1 (MQ=255)                                                                                                aCTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGGCCGACAGTTTCGTCACCCAGTGCCCGCATTGCCAGACCAgatcgga                                                        >  1:67297/1‑144 (MQ=255)                                                                                                aCTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGACCGACAGTTTCGTCACCCAGTGCCCGCATTGCCAGACCAGCTTTcg                                                        >  1:52786/1‑150 (MQ=255)                                                                                                      cccGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGACCGACAGTTTCGTCACCCAGTGCCCGCATTGCCAGACCAGCTTTCGCGTcac                                                  >  2:264524/1‑150 (MQ=255)                                                                                                       ccGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGACCGACAGTTTCGTCACCCAGTGCCCGCATTGCCAGACCAGCTTTCGCGTcacc                                                 >  1:145891/1‑150 (MQ=255)                                                                                                              tcgtGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCtaagcggcggccacgtcttcaccttgctcggcgaggatgcccgaaagcgccagcaggccacctgggcgaaccaggccggacaactgtggcgccagcgacaccagcgggc                                          >  2:13845‑M2/1‑41 (MQ=255)                                                                                                                    gcgACGGCTGGGTGCGAATCACTGGTCGACGACCATAAGCGGCCCTAGAATCCTTTTCTGCACCGCTCCCAGATCGCCGCATGACCGACAGTTTCGTCACCCAGTGCCCGCATTGCCAGACCAGCTTTCGCGTCACCCACCACCAGTTgg                                    <  2:283960/150‑1 (MQ=255)                                                                                                                            tgtgTGCGCAGCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTGTCTGCACAGCTCCCGGATCGCCGCATGACCGACAGTTTCGTCACCCAGTGCCCGCATTGCCAGACCAGCTTTCGCGTCACCCACCACCAGTTGGGCGTGGcc                            >  2:332360/4‑150 (MQ=255)                                                                                                                            agggTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGACCGACAGTTTCGTCACCCAGTGCCCGCATTGCCAGACCAGCTTTCGCGTCACCCACCACCAGTTGGGCGTGGcc                            >  2:581851/2‑150 (MQ=255)                                                                                                                               gTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGACCGACAGTTTCGTCACCCAGTGCCCGCATTGCCAGACCAGCTTTCGCGTCACCCACCACCAGTTGGGCGTGGCCcgt                         >  2:105642/1‑150 (MQ=255)                                                                                                                                                  gTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGACCGACAGTTTCGTCACCCAGTGCCCGCATTGCCAGACCa                                                               <  1:429930/93‑1 (MQ=255)                                                                                                                                                  gTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGACCGACAGTTTCGTCACCCAGTGCCCGCATTGCCAGACCa                                                               >  2:429930/1‑93 (MQ=255)                                                                                                                                                      cTAGGCGGGCCTAGAATACTGTTCTGCAGAGCTCCCGGGTCGCCGCATGACGAACAGTTTCGTCACCCAGTGCCCGCATTGGCAGACCATCGTTCGCGGCACCCACCGCCAGTTGAGCAGGGCCCGTGGCGTGGTGCGCTGCGGTCActg  >  2:20227/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                      TCCGGCCTGGTTCGCCCAGGTGGCCTGCTGGCGCTTTCGGGCATCCTCGCCGAGCAAGGTGAAGACGTGGCCGCCGCTTATGCCGCCGACTTTGAACTGGACCCGATCGTCGTGCGCGACGGCTGGGTGCGCATCAGTGGTCGGCGTCGCTAAGCGGGCCTAGAATACTTTTCTGCACAGCTCCCGGATCGCCGCATGACCGACAGTTTCGTCACCCAGTGCCCGCATTGCCAGACCAGCTTTCGCGTCACCCACCACCAGTTGGGCGTGGCCCGTGGCGTGGTGCGCTGCGGTCACTG  >  NC_002947/5480365‑5480663

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.