| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5716918 | 14 (0.610) | 4 (0.180) | 4/240 | NT | 19.3% | coding (370/708 nt) | PP_5019 | 16S rRNA (uracil(1498)‑N(3))‑methyltransferase |
| ? | NC_002947 | = 5716973 | 20 (0.900) | coding (425/708 nt) | PP_5019 | 16S rRNA (uracil(1498)‑N(3))‑methyltransferase | |||||
GCCACGCTGGGCGTGCCGCGGCTGATCCTGCTGAACAGCTACAAGGTCGAGAAAAGCTTCTGGCAAACGCCCTTTCTGCAGCCCGACACCATTCGCGAGAACCTGATCCTGGGCCTGGAACAGGCGCGTGACACCGTGCTGCCCGAGGTGATCATCGAAAAGCGCTTCAAGCCTTTTGTCGAAGACCGCCTGCCCACCATCGCCGCTGG‑CA‑CCCTGGGCCTGGTCGGCCACCCCGGCCCTTACCCAGCCTGTCCGCGCGCCGTAGAACAAGCCGTTACCCTGGC > NC_002947/5716837‑5717120 | gCCACGCTGGGCGTGCCGCGGCTGATCCTGCTGAACAGCTACAAGGTCGAGAAAAGCTTCTGGCAAACGCCCTTTCTGCAGCCCGACACCATTCGCGAGAACCTGATCCTGGGCCTGGAACAGGCGCGTGACACCGTGCTGCCCGAGGTg < 1:608792/150‑1 (MQ=255) ctgctgAACAGCTACAAGGTCGAGAAAAGCTTCTGGCAAACGCCCTTTCTGCAGCCCGACACCATTCGCGAGAACCTGATCCTGGGCCTGGAACAGGCGCGTGACACCGTGCTGCCCGAGGTGatcat < 2:36861/128‑1 (MQ=255) ctgctgAACAGCTACAAGGTCGAGAAAAGCTTCTGGCAAACGCCCTTTCTGCAGCCCGACACCATTCGCGAGAACCTGATCCTGGGCCTGGAACAGGCGCGTGACACCGTGCTGCCCGAGGTGatcat > 1:36861/1‑128 (MQ=255) aaCAGCTACAAGGTCGAGAAAAGCTTCTGGCAAACGCCCTTTCTGCAGCCCGACACCATTCGCGAGAACCTGATCCTGGGCCTGGAACAGGCGCGTGACACCGTGCTGCCCGAGGTGATCATCGAAAAGCGCTTCAAGCCTTTTGTCGaa < 1:593230/150‑1 (MQ=255) tCGAGAAAAGCTTCTGGCAAACGCCCTTTCTGCAGCCCGACACCATTCGCGAGAACCTGATCCTGGGCCTGGAACAGGCGCGTGACACCGTGCTGCCCGAGGTGATCATCGAAAAGCGCTTCAAGCCTTTTGTCGAAGACCGCCTGCcca > 1:158287/1‑150 (MQ=255) gCCCTTTCTGCAGCCCGACACCATTCGCGAGAACCTGATCCTGGGCCTGGAACAGGCGCGTGACACCGTgctgcagaaagggcgtttgccagaagcttttctcgaccttgtagctgttcagcaggatcagc > 1:179452‑M2/1‑69 (MQ=255) gCCCTTTCTGCAGCCCGACACCATTCGCGAGAACCTGATCCTGGGCCTGGAACAGGCGCGTGACACCGTgctgcagaaagggcgtttgccagaagcttttctcgaccttgtagctgttcagcaggatcagc < 2:179452‑M2/131‑63 (MQ=255) gCCCTTTCTGCAGCCCGACACCATTCGCGAGAACCTGATCCTGGGCCTGGAACAGGCGCGTGACACCGTgc < 1:474155‑M2/71‑3 (MQ=255) gCCCTTTCTGCAGCCCGACACCATTCGCGAGAACCTGATCCTGGGCCTGGAACAGGCGCGTGACACCGTgc > 2:474155‑M2/1‑69 (MQ=255) cccTTTCTGCAGCCCGACACCATTCGCGAGAACCTGATCCTGGGCCTGGAACAGGCGCGTGACACCGTgctgcagaaagggcgtttgccagaagcttttctcgaccttgtagctgttcagcaggatcagccgcggcacgcccagcgtgg > 2:611284‑M2/1‑68 (MQ=255) cccTTTCTGCAGCCCGACACCATTCGCGAGAACCTGATCCTGGGCCTGGAACAGGCGCGTGACACCGTgctgcagaaagggcgtttgccagaagcttttctcgaccttgtagctgttcagcaggatcagccgcggcacgcccagcgtgg < 1:611284‑M2/149‑82 (MQ=255) tGCAGCCCGACACCATTCGCGAGAACCTGATCCTGAGCCTGGAACAGGCGCGTGACACCGTGCTGCCCGAGGTGATCATCGAAAAGCGCTTAAAGCCTTTTGTCGAAGACCGCCTGCCCACCATCGCCGCTGG‑CA‑CCCTGGGCCTGGTCg < 2:158287/150‑1 (MQ=255) gACACCATTCGCGAGAACCTGATCCTGGGCCTGGAACAGGCGCGTGACACCGTGCTGCCCGAGGTGa > 1:302284/1‑67 (MQ=255) gACACCATTCGCGAGAACCTGATCCTGGGCCTGGAACAGGCGCGTGACACCGTGCTGCCCGAGGTGa < 2:302284/67‑1 (MQ=255) gaACCTGATCCTGGGCCTGGAACAGGCGCGTGACACCGTGCTGCCCGAGGTGATCATCGAAAAGCGCTTCAAGCCTTTTGTCGAAGACCGCCTGCCCACCATCGCCGCTGG‑CA‑CCCTGGGCCTGGTCGGCCACCCCGGCCCTTACCCAGc > 1:512343/1‑150 (MQ=255) ccTGATCCTGGGCCTGGAACAGGCGCGTGACACCGTGCTGCCCGAGGTGATCATCGAAAAGCGCTTCAAGCCTTTTGTCGAAGACCGCCTGCCCACCATCGCCGCTGG‑CA‑CCCTGGGCCTGGTCGGCCACCCCGGCCCTTACCCa > 1:15470/1‑145 (MQ=255) ccTGATCCTGGGCCTGGAACAGGCGCGTGACACCGTGCTGCCCGAGGTGATCATCGAAAAGCGCTTCAAGCCTTTTGTCGAAGACCGCCTGCCCACCATCGCCGCTGG‑CA‑CCCTGGGCCTGGTCGGCCACCCCGGCCCTTACCCa < 2:15470/145‑1 (MQ=255) ccTGATCCTGGGCCTGGAACAGGCGCGTGACACCGTGCTGCCCGAGGTGATCATCGAAAAGCGCTTCAAGCCTTTTGTCGAAGACCGCCTGCCCACCATCGCCGCTGG‑CA‑CCCTGGGCCTGGTCGGCCACCCCGGCCCTTACCCAGCCTg > 1:98398/1‑150 (MQ=255) cTGATCCTGGGCCTGGAACAGGCGCGTGACACCGTGCTGCCCGAGGTGATCATCGAAAAGCGCTTCAAGCCTTTTGTCGAAGACCGCCTGCCCACCATCGCCGCTGG‑CA‑CCCTGGGCCTGGTCGGCCACCCCGGCCCTTACCCAGCCTGt > 2:20276/1‑150 (MQ=255) tGATCCTGGGCCTGGAACAGGCGCGTGACACCGTGCTGCCCGAGGTGATCATCGAAAAGCGCTTCAAGCCTTTTGTCGAAGACCGCCTGCCCACCATCGCCGCTGG‑CA‑CCCTGGGCCTGGTCGGCCACCCCGGCCCTTACCCAGCCTGTc > 2:153632/1‑150 (MQ=255) tCCTGGGCCTGGAACAGGCGCGTGACACCGTGCTGCCCGAGGTGATCATCGAAAAGCGCTTCAAGCCTTTTGTCGAAGACCGCCTGCCCACCATCGCCGCTGG‑CA‑CCCTGGGCCTGGTCGGCCACCCCGGCCCTTACCCAGCCTGTCcgc > 2:55413/1‑150 (MQ=255) gggCCTGGAACAGGCGCGTGACACCGTGCTGCCCGAGGTGATCATCGAAAAGCGCTTCAAGCCTTTTGTCGAAGACCGCCTGCCCACCATCGCCGCTGG‑CA‑CCCTGGGCCTGGTCGGCCACCCCGGCCCTTACCCAGCCTGTCCgcgcgc < 1:55413/150‑1 (MQ=255) cTGGAACAGGCGCGTGACAGCGTGCTGCCAGAGGTGATCATCGAAAAGCGCTTCAAGCCTTTTGTCGAAGACCGCCTGCCCACCATCGCCGCTGG‑CA‑CCCTGGGCCTGGTCGGCCACCCCGGCCCTTACCCAGCCTGTCCGCGCGCCGTa > 2:228001/1‑150 (MQ=255) gAACAGGCGCGTGACACCGTGCTGCCCGAGGTGATCATCGAAAAGCGCTTCAAGCCTTTTGTCGAAGACCGCCTGCCCACCATCGCCGCTGG‑CA‑CCCTGGGCCTGGTCGGCCACCCCCCAGCGGGTTCAGCCTGTCCGCGCGCCGTAGaa < 1:478493/150‑1 (MQ=255) gAACAGGCGCGTGACACCGTGCTGCCCGAGGTGATCATCGAAAAGCGCTTCAAGCCTTTTGTCGAAGACCGCCTGCCCACCATCGCCGCAGGACAGCGCCCAGC‑‑GGGCTGCCACCCCGGCCCTTACCCAGCCTGTCCGCGCGCCGTAGaa > 2:478493/1‑150 (MQ=255) aaCAGGCGCGTGACACCGTGCTGCCCGAGGTGATCATCGAAAAGCGCTTCAAGCCTTTTGTCGAAGACCGCCTGCCCACCATCGCCGCTGG‑CA‑CCCTGGGCCTGGTCGGCCACCCCGGCCCTTACCCAGCCTGTCCGCGCGCCGTAGAAc > 1:79458/1‑150 (MQ=255) acCGTGCTGCCCGAGGTGATCATCGAAAAGCGCTTCAAGCCTTTTGTCGAAGACCGCCTGCCCACCATCGCCGCTGG‑CA‑CCCTGGGCCTGGTCGGCCACCCCGGCCCTTACCCAGCCTGTCCGCGCGCCGTAGAACAAGCCGTTACCCTg > 2:63245/1‑150 (MQ=255) cGTGCTGCCCGAGGTGATCATCGAAAAGCGCTTCAAGCCTTTTGTCGAAGACCGCCTGCCCACCATCGCCGCTGG‑CA‑CCCTGGGCCTGGTCGGCCACCCCGGCCCTTACCCAGCCTGTCCGCGCGCCGTAGAACAAGCCGTTACCCTGGc < 2:79458/150‑1 (MQ=255) | GCCACGCTGGGCGTGCCGCGGCTGATCCTGCTGAACAGCTACAAGGTCGAGAAAAGCTTCTGGCAAACGCCCTTTCTGCAGCCCGACACCATTCGCGAGAACCTGATCCTGGGCCTGGAACAGGCGCGTGACACCGTGCTGCCCGAGGTGATCATCGAAAAGCGCTTCAAGCCTTTTGTCGAAGACCGCCTGCCCACCATCGCCGCTGG‑CA‑CCCTGGGCCTGGTCGGCCACCCCGGCCCTTACCCAGCCTGTCCGCGCGCCGTAGAACAAGCCGTTACCCTGGC > NC_002947/5716837‑5717120 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |