New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 12249 | 35 (1.500) | 8 (0.360) | 6/240 | NT | 18.4% | coding (28/1104 nt) | recF | DNA replication/repair protein |
? | NC_002947 | = 12267 | 38 (1.730) | coding (46/1104 nt) | recF | DNA replication/repair protein |
GATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/12095‑12249 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcaccg‑GGT‑‑GCAAGTTGCGCACCGCGGTGACCATGATACGTCGAAGGGACATTTCGCCTGCTACAGGTTACAGGCGCATCGGCATGACAACGTAGGAAGAATCGTCATTGCCAGCTTCCTGCAGCAGCGCACTG < NC_002947/12267‑12140 GATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTCTAGCAGGCGAAATGTCCCTTCGACGTATCATGGT > 1:545563/1‑150 CTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCG‑GGT‑‑GCAAGTTGCGCACCGCGGT > 2:363274/1‑150 TGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGA < 1:264238/150‑1 TGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGA < 1:363274/150‑1 TGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGA < 1:153981/123‑1 TGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGA > 2:153981/1‑123 GTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGACCAT < 1:525424/95‑1 GTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGACCAT > 2:525424/1‑95 TCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTT‑‑GCACC‑CGGTGACCATGATACGTCGAAGGGACATTTCGCCTGCTACAGGTTACAGGCGCATCGGCATGACAACGTAGGAAGAATCGTCATTGCCAGCTTCCTGCAGCAGCGCA > 2:574314/1‑150 GTCACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGACCATGATACGTCGAAGGGACATTTCGCCTGCTACAGGTTACAGGCGCATCGGCATGACAACGTAGGAAGAATC > 1:497853/1‑104 GTCACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGACCATGATACGTCGAAGGGACATTTCGCCTGCTACAGGTTACAGGCGCATCGGCATGACAACGTAGGAAGAATC < 2:497853/104‑1 ACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGACCATGATACGTCGAAGGGACATTTCGCCTGCTACAGGTTACAGGCGCATCGGCATGACAACGTAGGAAGAATCGTCATTGCCAGCTTCCTGCAGCAGCGCACTG < 1:33684/132‑1 ACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGACCATGATACGTCGAAGGGACATTTCGCCTGCTACAGGTTACAGGCGCATCGGCATGACAACGTAGGAAGAATCGTCATTGCCAGCTTCCTGCAGCAGCGCACTG > 2:33684/1‑132 ACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGACCATGATACGTCGAAGGGACATTTCGCCTGCTACAGGTTACAGGCGCATCGGCATGACAACGTAGGAAGAATC < 1:519635/101‑1 ACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGACCATGATACGTCGAAGGGACATTTCGCCTGCTACAGGTTACAGGCGCATCGGCATGACAACGTAGGAAGAATC > 2:519635/1‑101 GATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/12095‑12249 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcaccg‑GGT‑‑GCAAGTTGCGCACCGCGGTGACCATGATACGTCGAAGGGACATTTCGCCTGCTACAGGTTACAGGCGCATCGGCATGACAACGTAGGAAGAATCGTCATTGCCAGCTTCCTGCAGCAGCGCACTG < NC_002947/12267‑12140 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |