New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 29219235 (1.500)4 (0.180) 4/238 NT 11.6% coding (573/966 nt) ssuA aliphatic sulfonatesABC transporter substrate‑binding protein
?NC_002947 = 292237 28 (1.280)coding (618/966 nt) ssuA aliphatic sulfonatesABC transporter substrate‑binding protein

GGCTCCAACGTGCACTACCTGCTGGTCCGCGCCCTGGAAGACGCCGGCCTCAAGTACAGCGACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/292037‑292192
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaggccCTTGCCGTCACGCAGGGTGCGCGCTTGCAGCTGCTGCTCGGCGGCGGCCTGGTAG  <  NC_002947/292237‑292183
                                                                                                                                                                                                                   
GGCTCCAACGTGCACTACCTGCTGGTCCGCGCCCTGGAAGACGCCGGCCTCAAGTACAGCGACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTAC                                                               <  2:12010/150‑1
     CAACGTGCACTACCTGCTGGTCCGCGCCCTGGAAGACGCCGGCCTCAAGTACAGCGACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGC                                                          >  2:519676/1‑150
     CAACGTGCACTACCTGCTGGTCCGCGCCCTGGAAGACGCCGGCCCCAAGTACAGCGACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGC                                                          >  2:319644/1‑150
                                     AAGACGCCGGCCTCAAGTACAGCGACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCC                                                         <  1:470944/119‑1
                                     AAGACGCCGGCCTCAAGTACAGCGACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCC                                                         >  2:470944/1‑119
                                                 TCAAGTACAGCGACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCCTTGCCGTCACGCAGGGTGCGCGCTTGCAGCTGCTGCTCGGCG              >  2:573457/1‑150
                                                            GACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCCTTGCCGTCACGCAGGGTGCGCGCTTGCAGCTGCTGCTCGGCGGCGGCCTGGTA   <  1:573457/150‑1
                                                                                                CGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCCTTGCCGTCACGCAGGGTGCGCGCTTGCAGCTGCTGCTCGGCGGCGGCCTGGTAG  <  1:546745/115‑1
                                                                                                CGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCCTTGCCGTCACGCAGGGTGCGCGCTTGCAGCTGCTGCTCGGCGGCGGCCTGGTAG  >  2:546745/1‑115
                                                                                                                                                                                                                   
GGCTCCAACGTGCACTACCTGCTGGTCCGCGCCCTGGAAGACGCCGGCCTCAAGTACAGCGACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/292037‑292192
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaggccCTTGCCGTCACGCAGGGTGCGCGCTTGCAGCTGCTGCTCGGCGGCGGCCTGGTAG  <  NC_002947/292237‑292183

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.