New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 292192	35 (1.500)	4 (0.180)	4/238	NT	11.6%	coding (573/966 nt)	ssuA	aliphatic sulfonatesABC transporter substrate‑binding protein
	?	NC_002947	= 292237	28 (1.280)					coding (618/966 nt)	ssuA	aliphatic sulfonatesABC transporter substrate‑binding protein

AACGTGCACTACCTGCTGGTCCGCGCCCTGGAAGACGCCGGCCTCAAGTACAGCGACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTCGCCACCCGCAACTATGCGACACAGCACCCAGCGGTGATCAACACCGTGATCGAGGAAGTGCGCGCTGTGGGTGA  >  NC_002947/292043‑292341                                                                                                                                                      |                                                                                                                                                      aaCGTCCACCACCTGCTCGTGGCCGCGCCGGACGACGCCGGCCCCAAGTCCCGCCCCATGCAGCCTGCCTGCCTGCCGCGGGCCGACGCCCGCGCCGCCGTCGAGCGCAGCAGCGTGGACGCCTGGGTAGTCCGCGGCCCCTGCCAGacc                                                                                                                                                       >  2:242826/1‑150 (MQ=255)      gCACTACCTGCTGGTCCGCGCCCTGGAAGACGCCGGCCTCAAGTACAGCGACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGCTCTGGGACCCCTACCAGgccgccgc                                                                                                                                                  >  2:404333/1‑150 (MQ=255)                 tgGTCCGCGCCCTGGAAGACGCCGGCCTCAAGTACAGCGACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGagcagcagc                                                                                                                                       <  2:429502/150‑1 (MQ=255)                  ggTCCGCGCCCTGGAAGACGCCGGCCTCAAGTACAGCGACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCt                                                                                                                                      <  1:262389/150‑1 (MQ=255)                                aaGACGCCGGCCTCAAGTACAGCGACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCC                                                                                                                                                       >  2:470944‑M1/1‑119 (MQ=255)                                aaGACGCCGGCCTCAAGTACAGCGACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCC                                                                                                                                                       <  1:470944‑M1/119‑1 (MQ=255)                                       cGGCCTCAAGTACAGCGACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGa                                                                                                                 >  2:184416/1‑150 (MQ=255)                                         gCCTCAAGTACAGCGACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACg                                                                                                               >  2:523366/1‑150 (MQ=255)                                            tCAAGTACAGCGACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCcttgccgtcacgcagggtgcgcgcttgcagctgctgctcggcg                                                                                                            >  2:573457‑M1/1‑107 (MQ=255)                                                    aGCGACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGag                                                                                                                                              >  2:468374/1‑108 (MQ=255)                                                    aGCGACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGag                                                                                                                                              <  1:468374/108‑1 (MQ=255)                                                       gACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCcttgccgtcacgcagggtgcgcgcttgcagctgctgctcggcggcggcctggta                                                                                                 <  1:573457‑M1/150‑55 (MQ=255)                                                       gACATCCAGCCGGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTc                                                                                                 <  1:61247/150‑1 (MQ=255)                                                        aCATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGagc                                                                                                                                             <  1:451639/105‑1 (MQ=255)                                                        aCATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGagc                                                                                                                                             >  2:451639/1‑105 (MQ=255)                                                           tCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGTTGCAATCTCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACa                                                                                             <  1:319644/150‑1 (MQ=255)                                                                 cTGTCTACCTGCCGCCGGCCGCCGCCGGCAAACCATTCGAACCCGCCTGCAGGACCGCCTGGATGATCTCGGAGCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCACACCCTAAGTGACTGCAAGGGCCTGGTCGACAaccacc                                                                                       >  1:565129/1‑150 (MQ=255)                                                                          tGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTAcc                                                                              >  1:70751/1‑150 (MQ=255)                                                                            ccgccgGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTc                                                                            <  1:519676/150‑1 (MQ=255)                                                                            ccgccgGCCGACGCCCGCGCCGCCTGCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCCAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTc                                                                            <  2:565129/150‑1 (MQ=255)                                                                                cggccgACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTCGCCa                                                                        <  1:110535/150‑1 (MQ=255)                                                                                    cgACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCt                                                                                 <  2:127649/137‑1 (MQ=255)                                                                                    cgACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCt                                                                                 >  1:127649/1‑137 (MQ=255)                                                                                           cgcgCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCcttgccgtcacgcagggtgcgcgcttgcagctgctgctcggcggcggcctggtag                                                                                                >  2:546745‑M1/1‑60 (MQ=255)                                                                                           cgcgCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCcttgccgtcacgcagggtgcgcgcttgcagctgctgctcggcggcggcctggtag                                                                                                <  1:546745‑M1/115‑56 (MQ=255)                                                                                             cgccgcCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTCGCCACCCGCAACTATGc                                                           <  1:404333/150‑1 (MQ=255)                                                                                             cgccgcCTTCGAGCGCGGCAGCGTGGATGCCGGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCGGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTCGCCACCCGCAACTATGc                                                           <  1:242826/150‑1 (MQ=255)                                                                                                cgccTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTCAGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTCGCCACCCGCAACTATGCGac                                                        <  1:159524/150‑1 (MQ=255)                                                                                                 gccTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTCGCCACCCGCAACTATGCGaca                                                       <  1:184416/150‑1 (MQ=255)                                                                                                    ttCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACgg                                                                                                              >  2:456855/1‑92 (MQ=255)                                                                                                    ttCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACgg                                                                                                              <  1:456855/92‑1 (MQ=255)                                                                                                        aGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTCGCCACCCGCAACTATGCGACACAGCAcc                                                <  1:539178/150‑1 (MQ=255)                                                                                                        aGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTCGCCACCCGCAACTATGCGACACAGCAcc                                                <  1:523366/150‑1 (MQ=255)                                                                                                               cAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTc                                                                            >  2:40374/1‑115 (MQ=255)                                                                                                               cAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTc                                                                            <  1:40374/115‑1 (MQ=255)                                                                                                                 gCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTCGCCACCCGCAACTATGCGACACAGCACCCAGCGGTGa                                       <  2:41404/150‑1 (MQ=255)                                                                                                                 gCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTCGCCACCCGCAACTATGCGACACAGCACCCAGCGGTGa                                       <  1:133856/150‑1 (MQ=255)                                                                                                                       aTGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTCGCCACCCGCAACTATGCGACACAGCACCCAGCGGTGATCAaca                                 <  2:543699/150‑1 (MQ=255)                                                                                                                         tccTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTACGTGAGGGCAAGGACCTGGTCGCCAACCGCCAGTTCTTCCTTGTGACCCGCAAATTAGTGATACAGCACCCGGTGGTGATTAACAcc                               >  2:188115/2‑150 (MQ=255)                                                                                                                                 gATCTGTGCCCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTCGCCACCCGCAACTATGCGACACAGCACCCAGCGGTGATCAACACCGTGATCGa                       <  2:234947/150‑1 (MQ=255)                                                                                                                                           cccTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTCGCCACCCGCAACTATGCGACACAGCACCCAGCGGTGATCAACACCGTGATCGAGGAAGTgcgc             >  2:58960/1‑150 (MQ=255)                                                                                                                                             cTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGggcctggtaggggtcccagatcacccaggcatccacgctgccgcgctcgaaggcggcgcg                                              <  1:546745‑M2/115‑61 (MQ=255)                                                                                                                                             cTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGggcctggtaggggtcccagatcacccaggcatccacgctgccgcgctcgaaggcggcgcg                                              >  2:546745‑M2/1‑55 (MQ=255)                                                                                                                                              tACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGggcctggtaggggtcccagatcacccaggcatccacgctgccgcgctcgaaggcggcgcgggcgtcggccggcggcaggtagacaggctggatgtc          <  1:573457‑M2/150‑97 (MQ=255)                                                                                                                                                 cAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTCGCCACCCGCAACTATGCGACACAGCACCCAGCGGTGATCAACACCGTGATCGAGGAAGTGCGCGCtgtg       <  2:70751/150‑1 (MQ=255)                                                                                                                                                 cAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTCGCCACCCGCAACTATGCGACACAGCACCCAGCGGTGATCAACACCGTGATCGAGGAAGTGCGCGCtgtg       >  2:514256/1‑150 (MQ=255)                                                                                                                                                      cgccgccgAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTCGCCACCCGCAACTATGCGACACAGCACCCAGCGGTGATCAaca                                 >  2:567571/1‑119 (MQ=255)                                                                                                                                                      cgccgccgAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTCGCCACCCGCAACTATGCGACACAGCACCCAGCGGTGATCAaca                                 <  1:567571/119‑1 (MQ=255)                                                                                                                                                      cgccgccgAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTCGCCACCCGCAACTATGCGACACAGCACCCAGCGGTGATCAACACCGTGATCGAGGAAGTGCGCGCTGTGGGTGa  <  2:45530/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                      AACGTGCACTACCTGCTGGTCCGCGCCCTGGAAGACGCCGGCCTCAAGTACAGCGACATCCAGCCTGTCTACCTGCCGCCGGCCGACGCCCGCGCCGCCTTCGAGCGCGGCAGCGTGGATGCCTGGGTGATCTGGGACCCCTACCAGGCCGCCGCCGAGCAGCAGCTGCAAGCGCGCACCCTGCGTGACGGCAAGGGCCTGGTCGACAACCACCAGTTCTACCTCGCCACCCGCAACTATGCGACACAGCACCCAGCGGTGATCAACACCGTGATCGAGGAAGTGCGCGCTGTGGGTGA  >  NC_002947/292043‑292341

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.