New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1586680	18 (0.770)	3 (0.130)	3/244	NT	15.3%	coding (768/909 nt)	PP_1391	LysR family transcriptional regulator
	?	NC_002947	= 1586719	16 (0.710)					coding (729/909 nt)	PP_1391	LysR family transcriptional regulator

TGTACGCCACTAGTATAGATCCCGATCCCACGCCGGTTCGTCCTTGAAACGCTGCACCAGGAAATCCAGCATGCTGCGCAAGGTCGCCGGCATGTGTTTGCGCGACGTATACACCGCATTCAGGTTCAGTTCACGCGGTTTGGCCTCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1586530‑1586680 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcCGCAGACGCCATACGCCGGGGTGAACTGGTGCGTCTGCTGCCTGAGGC  <  NC_002947/1586719‑1586672                                                                                                                                                                                                         TGTACGCCACTAGTATAGATCCCGATCCCACGCCGGTTCGTCCTTGAAACGCTGCACCAGGAAATCCAGCATGCTGCGCAAGGTCGCCGGCATGTGTTTGCGCGACGTATACACCGCATTCAGGTTCAGTTCACGCGGTTTGGTCTCAGG                                                   >  2:436016/1‑150                                            TTGAAACGCTGCACCAGGAAATCCAGCATGCTGCGCAAGGTCGCCGGCATGTGTTTGCGCGACGTATACACCGCATTCAGGTTCAGTTCACGCGGTTTGGTCTCAGGCCGCAGACGCCATACGCCGGGGTGAACTGGTGCGTCTGCTGCC        <  1:436016/150‑1                                                                                       CCGGCATGTGTTTGCGCGACGTATACACCGCATTCAGGTTCAGTTCACGCGGTTTGGCCTCAGGCCGCAGACGCCATACGCCGGGGTGAACTGGTGCGTCTGCTGCCTGAGGC  >  1:159892/1‑113                                                                                       CCGGCATGTGTTTGCGCGACGTATACACCGCATTCAGGTTCAGTTCACGCGGTTTGGCCTCAGGCCGCAGACGCCATACGCCGGGGTGAACTGGTGCGTCTGCTGCCTGAGGC  <  2:159892/113‑1                                                                                                                                                                                                         TGTACGCCACTAGTATAGATCCCGATCCCACGCCGGTTCGTCCTTGAAACGCTGCACCAGGAAATCCAGCATGCTGCGCAAGGTCGCCGGCATGTGTTTGCGCGACGTATACACCGCATTCAGGTTCAGTTCACGCGGTTTGGCCTCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1586530‑1586680 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcCGCAGACGCCATACGCCGGGGTGAACTGGTGCGTCTGCTGCCTGAGGC  <  NC_002947/1586719‑1586672

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.