New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1896917 = | 27 (1.160) | 4 (0.180) | 4/242 | NT | 14.4% | coding (199/318 nt) | sugE | transporter |
? | NC_002947 | 1896946 = | 22 (0.990) | coding (170/318 nt) | sugE | transporter |
CACCGCCTATGCCATCTGGACCGGCGTAGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1896948‑1896917 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taggcgGTGCCCAGCGGCAGTTCCTTCATGGCCAGGCCCAGCAGGCCCAGGCTGATGACCATGGCGCCGACGGTAA > NC_002947/1896946‑1897015 CACCGCCTATGCCATCTGGACCGGCGTAGGCGGTGCCCAGCGGCAGTTCCTTCATGGCCAGGCCCAGCAGGCCCAGGCTGATGACCATGGCGCCGACGGTAA < 1:548027/102‑1 CACCGCCTATGCCATCTGGACCGGCGTAGGCGGTGCCCAGCGGCAGTTCCTTCATGGCCAGGCCCAGCAGGCCCAGGCTGATGACCATGGCGCCGACGGTAA > 2:548027/1‑102 GCCTATGCCATCTGGACCGGCGTAGGCGGTGCCCAGCGGCAGTTCCTTCATGGCCAGGCCCAGCAGGCCCAGGCTGATGACCATGGC < 1:9380/87‑1 GCCTATGCCATCTGGACCGGCGTAGGCGGTGCCCAGCGGCAGTTCCTTCATGGCCAGGCCCAGCAGGCCCAGGCTGATGACCATGGC > 2:9380/1‑87 CACCGCCTATGCCATCTGGACCGGCGTAGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1896948‑1896917 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taggcgGTGCCCAGCGGCAGTTCCTTCATGGCCAGGCCCAGCAGGCCCAGGCTGATGACCATGGCGCCGACGGTAA > NC_002947/1896946‑1897015 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |