| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1896917 = | 27 (1.160) | 4 (0.180) | 4/242 | NT | 14.4% | coding (199/318 nt) | sugE | transporter |
| ? | NC_002947 | 1896946 = | 22 (0.990) | coding (170/318 nt) | sugE | transporter | |||||
CACCGCCTATGCCATCTGGACCGGCGTAGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1896948‑1896917‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taggcgGTGCCCAGCGGCAGTTCCTTCATGGCCAGGCCCAGCAGGCCCAGGCTGATGACCATGGCGCCGACGGTAA > NC_002947/1896946‑1897015 CACCGCCTATGCCATCTGGACCGGCGTAGGCGGTGCCCAGCGGCAGTTCCTTCATGGCCAGGCCCAGCAGGCCCAGGCTGATGACCATGGCGCCGACGGTAA < 1:548027/102‑1CACCGCCTATGCCATCTGGACCGGCGTAGGCGGTGCCCAGCGGCAGTTCCTTCATGGCCAGGCCCAGCAGGCCCAGGCTGATGACCATGGCGCCGACGGTAA > 2:548027/1‑102 GCCTATGCCATCTGGACCGGCGTAGGCGGTGCCCAGCGGCAGTTCCTTCATGGCCAGGCCCAGCAGGCCCAGGCTGATGACCATGGC < 1:9380/87‑1 GCCTATGCCATCTGGACCGGCGTAGGCGGTGCCCAGCGGCAGTTCCTTCATGGCCAGGCCCAGCAGGCCCAGGCTGATGACCATGGC > 2:9380/1‑87 CACCGCCTATGCCATCTGGACCGGCGTAGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1896948‑1896917‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taggcgGTGCCCAGCGGCAGTTCCTTCATGGCCAGGCCCAGCAGGCCCAGGCTGATGACCATGGCGCCGACGGTAA > NC_002947/1896946‑1897015 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |