New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2059626 =	15 (0.640)	3 (0.140)	3/236	NT	19.4%	intergenic (+17/+107)	PP_1835/PP_1836	hypothetical protein/ZIP family metal transporter
	?	NC_002947	2059707 =	11 (0.510)					intergenic (+98/+26)	PP_1835/PP_1836	hypothetical protein/ZIP family metal transporter

GCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2059691‑2059626 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgcgaaGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTG  >  NC_002947/2059707‑2059840                                                                                                                                                                                                          GCTCCCACAGGGTTATCACAGGGCATGTGCCAGTGGAGTACCGGAGGGAGCGGGCATGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGG                                                    >  1:172426/1‑150      CACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAA                                                                                      >  1:330343/1‑111      CACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCAAGAAA                                                                                      <  2:330343/111‑1                                                            CCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCGGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTG  <  1:384909/141‑1                                                            CCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCGGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTG  >  2:384909/1‑141                                                                                                                                                                                                          GCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2059691‑2059626 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgcgaaGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTG  >  NC_002947/2059707‑2059840

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.