New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2059626 =	15 (0.640)	3 (0.140)	3/236	NT	19.4%	intergenic (+17/+107)	PP_1835/PP_1836	hypothetical protein/ZIP family metal transporter
	?	NC_002947	2059707 =	11 (0.510)					intergenic (+98/+26)	PP_1835/PP_1836	hypothetical protein/ZIP family metal transporter

GAGGCTTTGAAAGTCGCCGTCCACATCTGATACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTG  >  NC_002947/2059580‑2059840                                                                                                                                |                                                                                                                                      gAGGCTTTGAAAGTCGCCGTCCACATCTGATACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCaa                                                                                                                 >  1:69119/1‑150 (MQ=255)  aGGCTTTGAAAGTCGCCGTCCACATCTGATACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAAt                                                                                                                <  2:382463/150‑1 (MQ=255)                               tACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCACGTAATCCAGCGCATCAGGCCTTGTGATAACCCTGTGGCAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAAcat                                                                                   <  1:291918/150‑1 (MQ=255)                                           cTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAAcatc                                                                                  <  1:19585/139‑1 (MQ=255)                                           cTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAAcatc                                                                                  >  2:19585/1‑139 (MQ=255)                                                            ccGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCa                                                      >  1:37068/1‑150 (MQ=255)                                                              gctcccacagggttatcacagggcatgtgccagtggagtaccggagggagcgggcatgcccgcgaaGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAgg                                                    >  1:172426‑M2/67‑150 (MQ=255)                                                                   cacagggttatcacagggcctgatgcgctggagtacctgagggagcgggcatgcccgcgaaGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGaaa                                                                                      >  1:330343‑M2/62‑111 (MQ=255)                                                                   cacagggttatcacagggcctgatgcgctggagtacctgagggagcgggcatgcccgcgaaGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCAAGaaa                                                                                      <  2:330343‑M2/50‑1 (MQ=255)                                                                   cTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTcgc                                               <  2:69119/150‑1 (MQ=255)                                                                          aCTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTc                                        <  1:521553/150‑1 (MQ=255)                                                                                       aGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGc                           >  1:210963/1‑150 (MQ=255)                                                                                         gCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCCGGGTCGCCGCTGTCTGGTGCCCGTTGCgg                         <  1:206222/150‑1 (MQ=255)                                                                                                            ggAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCt      <  2:210963/150‑1 (MQ=255)                                                                                                                         ccgcgaaGAGGCCGGCTCACGAAACATCAATCTTCAGCCCGGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTg  <  1:384909‑M2/134‑1 (MQ=255)                                                                                                                         ccgcgaaGAGGCCGGCTCACGAAACATCAATCTTCAGCCCGGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTg  >  2:384909‑M2/8‑141 (MQ=255)                                                                                                                                |                                                                                                                                      GAGGCTTTGAAAGTCGCCGTCCACATCTGATACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTG  >  NC_002947/2059580‑2059840

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.