| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2279206 = | 11 (0.470) | 5 (0.230) | 4/240 | NT | 29.1% | coding (303/2082 nt) | fadH | 2,4‑dienoyl‑CoA reductase |
| ? | NC_002947 | 2279232 = | 14 (0.640) | coding (329/2082 nt) | fadH | 2,4‑dienoyl‑CoA reductase | |||||
ACGGGTTGATCGGCGCCTGGATCGCGCTAGGTGCCACCTGCCGTGGGCTGTAGGCGTAGCGCCCGGCATGCAGTATCTGCAGGCAGATCTTGCCACCGGCAGCGTGCACCGCCTCGGTGACGATGCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2279336‑2279206‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggtgcACGCTGCCGGTGGCAAGATCTGCCTGCAGATACTGCATGCCGGGCGCTACGCCTACAGCCCACGGCAGGTGGCACCTAGCGCGATCCAGGCGCCGATCAACCCGTTCAAGCCCAAAGAGCTGGATGAGGCGGGCATCGAGAAGC > NC_002947/2279232‑2279375 ACGGGTTGATCGGCGCCTGGATCGCGCTAGGTGCCACCTGCCGTGGGCTGTAGGCGTAGCGCCCGGCATGCAGTATCTGCAGGCAGATCTTGCCACCGGCAGCGTGCACCGCATCGTCACCGAGGCGGTGCACGCTGCCGGTGGCAAGAT < 2:176133/150‑1 ACCGCCTCGGTGACGATGCGGTGCACGCTGCCGGTGGCAAGATCTGCCTGCAGATACTGCATGCCGGGCGCTACGCCTACAGCCCACGGCAGGTGGCACCTAGCGCGATCCAGGCGCCGATCAAC > 1:555131/1‑125 ACCGCCTCGGTGACGATGCGGTGCACGCTGCCGGTGGCAAGATCTGCCTGCAGATACTGCATGCCGGGCGCTACGCCTACAGCCCACGGCAGGTGGCACCTAGCGCGATCCAGGCGCCGATCAAC < 2:555131/125‑1 ACCGCCTCGGTGACGATGCGGTGCACGCTGCCGGTGGCAAGATCTGCCTGCAGATACTGCATGCCGG > 1:290205/1‑67 ACCGCCTCGGTGACGATGCGGTGCACGCTGCCGGTGGCAAGATCTGCCTGCAGATACTGCATGCCGG < 2:290205/67‑1 CGGTGCACGCTGCCGGTGGCAAGATCTGCCTGCAGATACTGCATGCCGGGCGCTACGCCTACAGCCCACGGCAGGTGGCACCTAGCGCGATCCAGGCGCCGATCAACCCGTTCAAGCCCAAAGAGCTGGATGAGGCGGGCATCGAGAAGC < 1:176133/150‑1 ACGGGTTGATCGGCGCCTGGATCGCGCTAGGTGCCACCTGCCGTGGGCTGTAGGCGTAGCGCCCGGCATGCAGTATCTGCAGGCAGATCTTGCCACCGGCAGCGTGCACCGCCTCGGTGACGATGCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2279336‑2279206‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggtgcACGCTGCCGGTGGCAAGATCTGCCTGCAGATACTGCATGCCGGGCGCTACGCCTACAGCCCACGGCAGGTGGCACCTAGCGCGATCCAGGCGCCGATCAACCCGTTCAAGCCCAAAGAGCTGGATGAGGCGGGCATCGAGAAGC > NC_002947/2279232‑2279375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |