New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2581091 =	26 (1.120)	4 (0.180)	4/238	NT	13.9%	coding (270/867 nt)	PP_2262	sugar ABC transporter permease
	?	NC_002947	2581119 =	25 (1.150)					coding (298/867 nt)	PP_2262	sugar ABC transporter permease

GCTGACCCCGAGCTTGGCCAGGGAAGCGCCGAGCAGGCCGATATCGGCACGGCCGAAAATCTGCCAGATAGTGCCGACCACGTTCCACGGGATCAGCAACGGGATAGCCATGACGATCAGGCACACCGAGGCCATGCGGCCTTTGGTTGGCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2581247‑2581091 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatggccTCGGTGTGCCTGATCGTCATGGCTATCCCGTTGCTGATCCCGTGGAACGTGGTCGGCA  >  NC_002947/2581119‑2581176                                                                                                                                                                                                                         GCTGACCCCGAGCTTGGCCAGGGAAGCGCCGAGCAGGCCGATATCGGCACGCCCGAAAATCTGCCAGATAGTACAGACCACGATCCACGGGATCAGCAACGGGATAGCCATGACGATCAGGCACACCGAGGCCATGCGGCCTTTGGTTGG                                                                   >  2:356347/1‑150       CCCGAGCTTGGCCAGGGAAGCGCCGAGCAGGCCGAAATCGGCACGGCGGAAAATCGTGCAGATAGTGCCGACCACGTCCCACGGGATCAGCAACGGGATAGCCATGACGATCAGGCACACCGAGGCCATGCGGCCTTTGGTTGGCATGGC                                                             >  1:77763/1‑150                                                                                                                             ACCGAGGCCATGCGGCCTTTGGTTGGCATGGCCTCGGTGTGCCTGATCGTCATGGCTATCCCGTTGCTGATCCCGTGGAACGTGGTCGGCA  <  1:165835/91‑1                                                                                                                             ACCGAGGCCATGCGGCCTTTGGTTGGCATGGCCTCGGTGTGCCTGATCGTCATGGCTATCCCGTTGCTGATCCCGTGGAACGTGGTCGGCA  >  2:165835/1‑91                                                                                                                               CGAGGCCATGCGGCCTTTGGTTGGCATGGCCTCGGTGTGCCTGATCGTCATGGCTATCCCGTTGCTGATCCCGTGGAA             >  1:351776/1‑78                                                                                                                               CGAGGCCATGCGGCCTTTGGTTGGCATGGCCTCGGTGTGCCTGATCGTCATGGCTATCCCGTTGCTGATCCCGTGGAA             <  2:351776/78‑1                                                                                                                                                                                                                         GCTGACCCCGAGCTTGGCCAGGGAAGCGCCGAGCAGGCCGATATCGGCACGGCCGAAAATCTGCCAGATAGTGCCGACCACGTTCCACGGGATCAGCAACGGGATAGCCATGACGATCAGGCACACCGAGGCCATGCGGCCTTTGGTTGGCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2581247‑2581091 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatggccTCGGTGTGCCTGATCGTCATGGCTATCCCGTTGCTGATCCCGTGGAACGTGGTCGGCA  >  NC_002947/2581119‑2581176

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.