New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2581091 =	26 (1.120)	4 (0.180)	4/238	NT	13.9%	coding (270/867 nt)	PP_2262	sugar ABC transporter permease
	?	NC_002947	2581119 =	25 (1.150)					coding (298/867 nt)	PP_2262	sugar ABC transporter permease

GTCCAGCCGCTACTTCGTCGGTGCCGACTGGTACCGCCAGGTGCTGCGCGACCCGGCGCTGCACGACGCATTGCTGCGCCAGTTCATTTACTCGGCCTGCGTCCTGCTGATCGAAATTCCATTGGGTATAGGCATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCGGTGTGCCTGATCGTCATGGCTATCCCGTTGCTGATCCCGTGGAACGTGGTCGGCACTATC‑TGGCAGATTTTCGGCCGTGCCGATATCGGCCTGCTCGGCGCTTCCCTGGCCAAG  >  NC_002947/2580950‑2581235                                                                                                                                              |                                                                                                                                                  gTCCAGCCGCTACTTCGTCGGTGCCGACTGGTACCGCCAGGTGCTGCGCGACCCGGCGCTGCACGACGCATTGCTGCGCCAGTTCATTTACTCGGCCTGCGTCCTGCTGATCGAAATTCCATTGGGTATAGGCATCGCTCTGGCCATGcc                                                                                                                                           >  1:403116/1‑150 (MQ=255) gTCCAGCCGCTACTTCGTCGGTGCCGACTGGTACCGCCAGGTGCTGCGCGACCCGGCGCTGCACGACGCATTGCTGCGCCAGTTCATTTACTCGGCCTGCGTCCTGCTGATCGAAATTCCATTGGGTATAGGCATCGCTCTGGCCATGcc                                                                                                                                           >  1:388551/1‑150 (MQ=255)       ccGCTACTTCGTCGGTGCCGACTGGTACCGCCAGGTGCTGCGCGACCCGGCGCTGCACGACGCATTGCTGCGCCAGTTCATTTACTCGGCCTGCGTCCTGCTGATCGAAATTCCATTGGGTATAGGCATCGCTCTGGCCATGccaaccaa                                                                                                                                     >  2:337930/1‑150 (MQ=255)              ttCGTCGGTGCCGACTGGTACCGCCAGGTGCTGCGCGACCCGGCGCTGCACGACGCATTGCTGCGCCAGTTCATTGAGTCGGCCTGCGTCCTCCTGATAGCAGTTCGATTGTGGAGATGCATCGCTCTGGCCTTGCCAACCAAAGGTCgg                                                                                                                              >  1:442195/1‑149 (MQ=255)                        ccGACTGGTACCGCCAGGTGCTGCGCGACCCGGCGCTGCACGACGCATTGCTGCGCCAGTTCATTTACTCGGCCTGCGTCCTGCTGATCGAAATTCCATTGGGTATAGGCATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCgg                                                                                                                    <  2:4370/150‑1 (MQ=255)                           aCTGGTACCGCCAGGTGCTGCGCGACCCGGCGCTGCACGACGCATTGCTGCGCCAGTTCATTTACTCGGCCTGCGTCCTGCTGATCGAAATTCCATTGGGTATAGGCATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCGgtgt                                                                                                                 >  2:3771/1‑150 (MQ=255)                                     ccAGGTGCTGCGCGACCCGGCGCTGCACGACGCATTGCTGCGCCAGTTCATTTACTCGGCCTGCGTCCTGCTGATCGAAATTCCATTGGGTATAGGCATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCGGTGTGCCTGATCGt                                                                                                       >  1:478601/1‑150 (MQ=255)                                        ggTGCTGCGCGACCCGGCGCTGCACGACGCATTGCTGCGCCAGTTCATTTACTCGGCCTGCGTCCTGCTGATCGAAATTCCATTGGGTATAGGCATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCGGTGTGCCTGATCGTCAt                                                                                                    <  2:478601/150‑1 (MQ=255)                                         gTGCTGCGCGACCCGGCGCTGCACGACGCATTGCTGCGCCAGTTCATTTACTCGGCCTGCGTCCTGCTGATCGAAATTCCATTGGGTATAGGCATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCGGTGTGCCTGATCGTCATg                                                                                                   <  1:369059/150‑1 (MQ=255)                                                    cccGGCGCTGCACGACGCATTGCTGCGCCAGTTCATTTACTCGGCCTGCGTCCTGCTGATCGAAATTCCATTGGGTATAGGCATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCGGTGTGCCTGATCGTCATGGCTATCCCGtt                                                                                        >  2:265079/1‑150 (MQ=255)                                                      cGGCGCTGCACGACGCATTGCTGCGCCAGTTCATTTACTCGAGCTGCGTGCTGCTGATCGAAATTCCATTGGGTATAGGCATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCGGTGTGCCTGATCGTCATGGCTATCCTGTTGc                                                                                      >  1:261716/1‑150 (MQ=255)                                                            tGCACGACGCATTGCTGCGCCCGTTCATTTACTCGGCCTGCGTCCTCCTGCTCGAAATTCCATTGGGTATAAGCATCGCTCTGGCCATGCCAACCAAAGGCTGCATAGCCTCGGTGTGCCTGAATGTCATGACTACACCGTTGCTGATcc                                                                                >  2:77763/1‑150 (MQ=255)                                                            tGCACGACGCATTGCTGCGCCAGTTCATTTACTCGGCCTGCGTCCTGCTGATCGAAATTCCATTGGGTATAGGCATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCGGTGTGCCTGATCGTCATGGCTATCCCGTTGc                                                                                      >  2:237668/1‑144 (MQ=255)                                                            tGCACGACGCATTGCTGCGCCAGTTCATTTACTCGGCCTGCGTCCTGCTGATCGAAATTCCATTGGGTATAGGCATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCGGTGTGCCTGATCGTCATGGCTATCCCGTTGc                                                                                      <  1:237668/144‑1 (MQ=255)                                                                       ttGCTGCGCCAGTTCATTTACTCGGCCTGCGTCCTGCTGATCGAAATTCCATTGGGTATAGGCATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCGGTGTGCCTGATCGTCATGGCTATCCCGTTGCTGATCCCGTGGAACGTg                                                                     <  2:79057/150‑1 (MQ=255)                                                                              gcCAGTTCATTTACTCGGCCTGCGTCCTGCTGATCGAAATTCCATTGGGTATAGGCATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCGGTGTGCCTGATCGTCATGGCTATCCCGTTGCTGATCCCGTGGAACGTGGTCGGCa                                                              <  1:150629/150‑1 (MQ=255)                                                                                cAGTTCATTTACTCGGCCTGCGTCCTGCTGATCGAAATTCCATTGGGTATAGGCATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCGGTGTGCCTGATCGTCATGGCTATCCCGTTGCTGATCCCGTGGAACGTGGTCGGCACt                                                            >  2:462713/1‑150 (MQ=255)                                                                                cAGTTCATTTACTCGGCCTGCGTCCTGCTGATCGAAATTCCATTGGGTATAGGCATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCCAGGTGAACCGGATCGTCATGGCTATCCCGTTGCTGATCCCGTGGAACGTGGTCGGCACt                                                            >  2:16539/1‑150 (MQ=255)                                                                                   ttCATTTACTCGGCCTGCGTCCTGCTGATCGAAATTCCATTGGGTATAGGCATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCGGTGTGCCTGATCGTCATGGCTATCCCGTTGCTGATCCCGTGGAACGTGGTCGGCACTATc                                                         <  2:388551/150‑1 (MQ=255)                                                                                    tgccgaccacgttccacgggatcagcaacgggatagccatgacgatcaggcacaccgaGGCCATGCCAACCAAAGGCCGCATGGCCTCGgt                                                                                                                   <  1:165835‑M1/33‑1 (MQ=255)                                                                                    tgccgaccacgttccacgggatcagcaacgggatagccatgacgatcaggcacaccgaGGCCATGCCAACCAAAGGCCGCATGGCCTCGgt                                                                                                                   >  2:165835‑M1/59‑91 (MQ=255)                                                                                               ttccacgggatcagcaacgggatagccatgacgatcaggcacaccgaGGCCATGCCAACCAAAGGCCGCATGGCCTCg                                                                                                                     <  2:351776‑M1/31‑1 (MQ=255)                                                                                               ttccacgggatcagcaacgggatagccatgacgatcaggcacaccgaGGCCATGCCAACCAAAGGCCGCATGGCCTCg                                                                                                                     >  1:351776‑M1/48‑78 (MQ=255)                                                                                               gCCTGCGTCCTGCTGATCGAAATTCCATTGGGTATAGGCATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCGGTGTGCCTGATCGTCATGGCTATCCCGTTGCTGATCCCGTGGAACGTGGTCGGCACTATC‑TGGCAGATTTTc                                            <  2:442195/150‑1 (MQ=255)                                                                                                                 aaaatcacATTGGGTATAGGCCTCGCTGTCGCTATGCCAACCAAAGGCCGCATGGCCGCGGTGTGCCTGATCGTCATGGCTTTCCCGTTGCTGGTCCCATGGAGCCTGGTCCGCATGATC‑TGTCAGATTTTCGTCCGTGCCGGTATCTGc                          <  2:6494/143‑1 (MQ=255)                                                                                                                       ccATTGGGTATAGGCATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCGGTGTGCCTGATCGTCATGGCTATCCCGTTGCTGATCCCGTGGAACGTGGTCGGCACTATC‑TGGCAGATTTTCGGCCGTGCCGATATCGGCCTGCTc                    <  1:462713/150‑1 (MQ=255)                                                                                                                                  aGGCATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCGGTGTGCCTGATCGTCATGGCTATCCCGTTGCTGATCCCGTGGAACGTGGTCGGCACTATC‑TGGCAGATTTTCGGCCGTGCCGATATCGGCCTGCTCGGCGCTTCCCt         >  1:83334/1‑150 (MQ=255)                                                                                                                                    gCATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCGGTGTGCCTGATCGTCATGGCTATCCCGTTGCTGATCCCGTGGAACGTGGTCGGCACTATC‑TGGCAGATTTTCGGCCGTGCCGATATCGGCCTGCTCGGCGCTTCCCTgg       >  2:299536/1‑150 (MQ=255)                                                                                                                                     cATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCGGTGTGCCTGATCGTCATGGCTATCCCGTTGCTGATCCCGTGGAACGTGGTCGGCACTATC‑TGGCAGATTTTCGGCCGTGCCGATATCGGCCTGCTCGGCGCTTCCCTGGc      <  2:83334/150‑1 (MQ=255)                                                                                                                                      aTCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCGGTGTGCCTGATCGTCATGGCTATCCCGTTGCTGATCCCGTGGAACGTGGTCGTCACTATC‑TGGCAGATTTTCGGCCGTGCCGATATCGGCCTGCTCGGCGCTTCCCTGGcc     >  2:141727/1‑150 (MQ=255)                                                                                                                                         gCTCTGGCCCTACCCACAAAAGGCCGCATTGGCTCGGGGTGCCTGATTGTCATGGCTATCCCGTTGCTGATCCCGTCGAACGTGGTCGGCCCTACCACGCCTGAGCATC‑CCGGTCCCGAGATTGGCCTGCGTGTCGCTTCCCTGGCCAAg  >  2:135371/1‑150 (MQ=255)                                                                                                                                              |                                                                                                                                                  GTCCAGCCGCTACTTCGTCGGTGCCGACTGGTACCGCCAGGTGCTGCGCGACCCGGCGCTGCACGACGCATTGCTGCGCCAGTTCATTTACTCGGCCTGCGTCCTGCTGATCGAAATTCCATTGGGTATAGGCATCGCTCTGGCCATGCCAACCAAAGGCCGCATGGCCTCGGTGTGCCTGATCGTCATGGCTATCCCGTTGCTGATCCCGTGGAACGTGGTCGGCACTATC‑TGGCAGATTTTCGGCCGTGCCGATATCGGCCTGCTCGGCGCTTCCCTGGCCAAG  >  NC_002947/2580950‑2581235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.