New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2942765 =	18 (0.770)	3 (0.130)	3/244	NT	13.5%	intergenic (‑523/‑850)	PP_2575/PP_2577	hypothetical protein/paraquat‑inducible protein B
	?	NC_002947	2942805 =	21 (0.940)					intergenic (‑563/‑810)	PP_2575/PP_2577	hypothetical protein/paraquat‑inducible protein B

GCCACGCATGCACAGGGCAAAGCCGGGGGCACGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2942803‑2942765 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccTGGAAAGCCTGCGGCCCTGGAGCATGCTGGAGGTGTGTCTGCTGGGGGCGATGGTGGCGGTGATCAAGCTGGCGGGGCTGCTCGATGTGATCCCCGGTATCGGCCTGCTGGCC  >  NC_002947/2942805‑2942917                                                                                                                                                          GCCACGCATGCACAGGGCAAAGCCGGGGGCACGCTGGCCTGGAAAGCCTGCGGCCCTGGAGCATGCTGGAGGTGTGTCTGCTGGGGGCGATGGTGGCGG                                                       >  1:600085/1‑99 GCCACGCATGCACAGGGCAAAGCCGGGGGCACGCTGGCCTGGAAAGCCTGCGGCCCTGGAGCATGCTGGAGGTGTGTCTGCTGGGGGCGATGGTGGCGG                                                       <  2:600085/99‑1   CACGCATGCACAGGGCAAAGCCGGGGGCACGCTGGCCTGGAAAGCCTGCGGCCCTGGAGCATGCTGGAGGTGTGTCTGCTGGGGGCGATGGTGGCGGTGATCAAGCTGGCGGGGCTGCTCGATGTGATCCCCGGTATCGGCCTGCTGGCC  >  2:28122/1‑150                                     GCCTGGAAAGCCTGCGGCCCTGGAGCATGCTGGAGGTGTGTCTGCTGGGGGCGATGGTGGCGGTGATCAAGCTGGCGGGGCTGCTCGA                              >  1:373092/1‑88                                     GCCTGGAAAGCCTGCGGCCCTGGAGCATGCTGGAGGTGTGTCTGCTGGGGGCGATGGTGGCGGTGATCAAGCTGGCGGGGCTGCTCGA                              <  2:373092/88‑1                                                                                                                                                          GCCACGCATGCACAGGGCAAAGCCGGGGGCACGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2942803‑2942765 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccTGGAAAGCCTGCGGCCCTGGAGCATGCTGGAGGTGTGTCTGCTGGGGGCGATGGTGGCGGTGATCAAGCTGGCGGGGCTGCTCGATGTGATCCCCGGTATCGGCCTGCTGGCC  >  NC_002947/2942805‑2942917

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.