| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5561207 | 30 (1.290) | 4 (0.180) | 4/242 | NT | 10.9% | coding (512/870 nt) | hflC | integral membrane ATP‑dependent zinc metallopeptidase |
| ? | NC_002947 | = 5561224 | 37 (1.670) | coding (495/870 nt) | hflC | integral membrane ATP‑dependent zinc metallopeptidase | |||||
AGCCTCGGCCAGCAGCACACGGCGCTGACGGTCGGCATCGGCACGGATACCCTCAGCCAGCTCGTTACCCTTGGCACGGTGCTCGCGGGCTTCACGCTCACGCTCGGTGCTCATGCGGTCGAACACGCTGCGGTTGACTTCCTTCGGCAGGTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5561053‑5561207‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgaCGTGCGCGTCAAG‑GC‑CATCGACCTGCCGAAGGAAGTCAACCGCAGCGTGTTCGACCGCATGAGCACCGAGCGTGAGCGTGAAGCCCGCGAGCACCGTGCCAAGGGTAACGAGCTGGCTGAGGGTATCCGTGCCGATGCCGACCG < NC_002947/5561224‑5561081 AGCCTCGGCCAGCAGCACACGGCGCTGACGGTCGGCATCGGCACGGATACCCTCAGCCAGCTCGTTACCCTTGGCACGGTGCTCGCGGGCTTCACGCTCACGCTCGGTGCTCATGCGGTCGAACACGCTGCGGTTGACTTCCTTCGGCAG < 2:229970/150‑1 CCTCGGCCAGCAGCACACGGCGCTGACGGTCGGCATCGGCACGGATACCCTCAGCCAGCTCGTTACCCTTGGCACGGTGCTCGCGGGCTTCACGCTCACGCTCGGTGCTCATGCGGTCGAACACGCTGCGGTTGACTTCCTTCGGCAGGT > 2:414941/1‑150 TCGGCCAGCAGCACACGGCGCTGACGGTCGGCATCGGCACGGATACCCTCAGCCAGCTCGTTACCCTTGGCACGGTGCTCGCGGGCTTCACGCTCACGCTCGGTGCTCATGCGGTCGAACACGCTGCGGTTGACTTCCTTCGGCAGGTCG > 2:111748/1‑150 CCTCAGCCAGCTCGTTACCCTTGGCACGGTGCTCGCGGGCTTCACGCTCACGCTCGGTGCTCATGCGGTCGAACACGCTGCGGTTGACTTCCTTCGGCAGGTCGACGTGCGCGTCAAG‑GC‑CATCGACCTGCCGAAG > 1:379064/1‑136 CCTCAGCCAGCTCGTTACCCTTGGCACGGTGCTCGCGGGCTTCACGCTCACGCTCGGTGCTCATGCGGTCGAACACGCTGCGGTTGACTTCCTTCGGCAGGTCGACGTGCGCGTCAAG‑GC‑CATCGACCTGCCGAAG < 2:379064/136‑1 GCGGTCGAACACGCTGCGGTTGACTTCCTTCGGCAGGTCGATGGCCTTGACGCG‑CA‑CGTCGACCTGCCGAAGGAAGTCAACCGCAGCGTGTTCGACCGCATGAGCACCGAGCGTGAGCGTGAAGCCCGCGAGCACCGTGCCAAGGGTAAC > 2:410197/1‑150 CGAACACGCTGCGGTTGACTTCCTTCGGCAGGTCGATG‑GC‑CTTGACGCGCACGTCGACCTGCCGAAGGAAGTCAACCGCAGCGTGTTCGACCGCATGAGCACCGAGCGTGAGCGTGAAGCCCGCGAGCACCGTGCCAAGGGTAACGAGCT < 1:410197/150‑1 GGTCGACGTGCGCGTCAAG‑GC‑CATCGACCTGCCGAAGGAAGTCAACCGCAGCGTGTTCGACCGCATGAGCACCGAGCGTGAGCGTGAAGCCCGCGAGCACCGTGCCAAGGGTAACGAGCTGGCTGAGGGTATCCGTGCCGATGCCGACCG > 1:303311/1‑150 AGCCTCGGCCAGCAGCACACGGCGCTGACGGTCGGCATCGGCACGGATACCCTCAGCCAGCTCGTTACCCTTGGCACGGTGCTCGCGGGCTTCACGCTCACGCTCGGTGCTCATGCGGTCGAACACGCTGCGGTTGACTTCCTTCGGCAGGTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5561053‑5561207‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgaCGTGCGCGTCAAG‑GC‑CATCGACCTGCCGAAGGAAGTCAACCGCAGCGTGTTCGACCGCATGAGCACCGAGCGTGAGCGTGAAGCCCGCGAGCACCGTGCCAAGGGTAACGAGCTGGCTGAGGGTATCCGTGCCGATGCCGACCG < NC_002947/5561224‑5561081 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |