New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 26802	11 (0.470)	7 (0.320)	5/240	NT	38.5%	coding (922/924 nt)	PP_0021	hypothetical protein
	?	NC_002947	= 26806	12 (0.550)					intergenic (+2/+183)	PP_0021/PP_0022	hypothetical protein/hypothetical protein

TCAAATTCGATTCGGCTTGGTTCGAATCCCTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTTCACTGTAACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGA  >  NC_002947/26677‑26949                                                                                                                                  |                                                                                                                                                tcaAATTCGATTCGGCTTGGTTCGAATCCCTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACtt                                                                                                                             >  1:252174/1‑150 (MQ=255) tcaAATTCGATTCGGCTTGGTTCGAATCCCTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTCCGCaggcctgagtcagctccagc                                                                                                                             <  1:292554‑M2/150‑21 (MQ=255)              ggATTGGTTCGAATCCATTGTCGGGAGGCCGGTTGAGCATCCTTATAGCAGAATGGATAGAGGGAAGGTGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCGGACTCAGGCCTCCTCaggcctgagtcagctccagcagatcgcccagtt                                                                                                                >  2:292554‑M2/1‑117 (MQ=255)                     ttCGAATCCCTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTTCACTGTAACCACAGt                                                                                                         >  1:269208/1‑150 (MQ=255)                             ccTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTTCACTGTAACCACAGTGGTTTACa                                                                                                 <  2:217650/150‑1 (MQ=255)                                                  tcatcCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTTCACTGTAACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACaa                                                                            >  2:546752/1‑150 (MQ=255)                                                    atcCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGa                                                                                                                                                >  1:557521‑M2/1‑79 (MQ=255)                                                    atcCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGa                                                                                                                                                <  2:557521‑M2/80‑2 (MQ=255)                                                    atcCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTTCACTGGAACCACAGTGGTTTACAGTGAAAAAGAGTGGTTTACAACg                                                                          >  1:365533/1‑150 (MQ=255)                                                        ggaTCGCAGGATGGATAGAGTGAAGAGGGCTCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTTCACTGTAACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGc                                                                      <  2:252174/148‑1 (MQ=255)                                                             gCAGAATGGAGAGAGTGAAGATGGCGCGGGAGGAACGGGGCGATCTGTTGTAGCGGACTCAGGCCGGAGGAGGCCTGTTGTAAACCACTTTTTTTCACTGTAACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTCCAACGTAGCTACGa                                                                 >  2:179309/1‑150 (MQ=38)                                                                         gagTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTTCACTGTAACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTgg                                                     <  1:237950/150‑1 (MQ=255)                                                                                            ggaACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTTCACTGTAACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAgcgc                                  >  1:1857/1‑150 (MQ=255)                                                                                                              ggAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTTCACTGTAACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGtt                <  2:1857/150‑1 (MQ=255)                                                                                                                     aCTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTTCACTGTAACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCgg         <  1:546752/150‑1 (MQ=255)                                                                                                                       tCAGGCCTGAGGaggcctgagtcagctccagcagatcgcccagttcctcccgggccatcttcactctatccattctgcgataaggatgatcaaccggcatccggataagggattcgaaccaagccgaatcgaatttgatgacttccttgt       <  1:413795‑M2/150‑139 (MQ=255)                                                                                                                       tCAGGCCTGAGGaggcctgagtcagctccagcagatcgcccagttcctcccgggccatcttcactctatccattctgcgataaggatgatcaaccggcatccggataagggattcgaaccaagccgaatcgaatttgatgacttccctgt       <  2:331840‑M2/150‑139 (MQ=255)                                                                                                                       tCAGGCCTGAGGaggcctgagtcagctccagcaga                                                                                                                          >  1:466942‑M2/1‑12 (MQ=255)                                                                                                                       tCAGGCCTGAGGaggcctgagtcagctccagcaga                                                                                                                          <  2:466942‑M2/35‑24 (MQ=255)                                                                                                                          ggCCTGAGGaggcctgagtcagctccagcagatcgcccagttcctcccgggccatcttcactctatccattctgcgataaggatgatcaaccggcatccggataagggattcgaaccaagccgaatcgaatttgatgacttccctgtgaa    >  1:331840‑M2/1‑9 (MQ=255)                                                                                                                            ccTGAGGAGGCCTGTTGTAAACCACTTTTTTTCACTGTAACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGa  >  2:144078/1‑150 (MQ=255)                                                                                                                                  |                                                                                                                                                TCAAATTCGATTCGGCTTGGTTCGAATCCCTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTTCACTGTAACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGA  >  NC_002947/26677‑26949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.