New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5638996	17 (0.730)	4 (0.180)	4/248	NT	19.7%	coding (37/1320 nt)	PP_4950	hypothetical protein
	?	NC_002947	= 5639018	16 (0.700)					coding (59/1320 nt)	PP_4950	hypothetical protein

CAAGGGCGAACCCAATCAGGTGGTGCGGGTCGGCCACGCCTCGCCGGCCTGTGTGTTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGC  >  NC_002947/5638870‑5639155                                                                                                                                                     |                                                                                                                                          cAAGGGCGAACCCAATCAGGTGGTGCGGGTCGGCCACGCCTCGCCGGCCTGTGTGTTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCCAg                                                                                                                                          <  1:609542/150‑1 (MQ=255)  aaGGGCGAACCCAATCAGGTGGTGCGGGTCGGCCACGCCTCGCCGGCCTGTGTGTTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAgc                                                                                                                                         <  1:303595‑M2/150‑3 (MQ=255)            ccAATCAGGTGGTGCGGGTCGGCCACGCCTCGCCGGCCTGTGTGTTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCt                                                                                                                               >  1:215409/1‑150 (MQ=255)               aTCAGGTGGTGCGGGTCGGCCACGCCTCGCCGGCCTGTGTGTTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCgg                                                                                                                            <  1:220382/150‑1 (MQ=255)                    gtggtgCGGGTCGGCCACGCCTCGCCGGCCTGTGTGTTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACa                                                                                                                       <  1:270409/150‑1 (MQ=255)                       gtgCGGGTCGGCCACGCCTCGCCGGCCTGTGTGTTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTg                                                                                                                    >  2:280669/1‑150 (MQ=255)                              tCGGCCACGCCTCGCCGGCCTGTGTGTTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCTCGCCCGCCTGAAGGGCGGCGTgcacctccccgaccagggttt                                                                                                                      >  1:125690‑M2/1‑120 (MQ=255)                              tCGGCCACGCCTCGCCGGCCTGTGTGTTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCTCGCCCGCCTGAAGGGCGGCGTgcacctccccgaccagggttt                                                                                                                      <  2:125690‑M2/141‑22 (MQ=255)                                                ccTGTGTGTTCCGACAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGttt                                                                                           <  1:280669/150‑1 (MQ=255)                                                      tgtTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCa                                                                                     >  2:600448/1‑150 (MQ=255)                                                        ttCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCTCGCCCGCCTGAAGGGCGGCGTgcacctccccgaccagggtttcgaa                                                                                                                  <  1:277548‑M2/119‑26 (MQ=255)                                                        ttCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCTCGCCCGCCTGAAGGGCGGCGTgcacctccccgaccagggtttcgaa                                                                                                                  >  2:277548‑M2/1‑94 (MQ=255)                                                                          ttCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAg                                                                     <  2:468323/146‑1 (MQ=255)                                                                          ttCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAg                                                                     >  1:468323/1‑146 (MQ=255)                                                                                   gaCGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCa                                                        <  1:600448/150‑1 (MQ=255)                                                                                            tgaAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAgccaggcca                                               <  2:215409/150‑1 (MQ=255)                                                                                             gaAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAgccaggccag                                              >  1:63414/1‑150 (MQ=255)                                                                                                gCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAgcgc                                           >  2:473797/1‑150 (MQ=255)                                                                                                              cccTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTgg                             <  2:63414/150‑1 (MQ=255)                                                                                                                 tGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTgc                          >  2:42946/1‑150 (MQ=255)                                                                                                                       gggAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATg                    <  1:413654/150‑1 (MQ=255)                                                                                                                                         ttCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGACATCCGGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAAcagc  <  2:303595/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                          CAAGGGCGAACCCAATCAGGTGGTGCGGGTCGGCCACGCCTCGCCGGCCTGTGTGTTCCGCCAGATCGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGC  >  NC_002947/5638870‑5639155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.