| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5216577 = | 22 (0.870) | 8 (0.330) | 8/262 | 1.7 | 28.0% | coding (177/2331 nt) | PP_4596 | putative oxidoreductase |
| ? | NC_002947 | 5216608 = | 20 (0.820) | coding (146/2331 nt) | PP_4596 | putative oxidoreductase | |||||
GGACTACAAGGGCGCCGCTGCCGGCTGGGGGGCGCTCAAAAGCGTGACCAAGAGCTGGCTGGGCAGCGACAACGCCTTCAAGAACCTGCGGGCCATGCTCAAGACCAACCAGAACGGCGGTTTCGACTGCCCCGGCTGTGCCTGGGGCGAGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5216730‑5216577‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtcgAAACCGCCGTTCTGGTTGGTCTTGAGCATGGCCCGCAGGTTCTTGAAGGCGTTGTCGCTGCCCAGCCAGCTCTTGGTCACGCTTTTGAGCGCCCCCCAGCCGGCAGCGGCGCCCTTGTAGTCCCTGATGTGTTCGTCCTGGCTCATGCG > NC_002947/5216608‑5216756 GGACTACAAGGGCGCCGCTGCCGGCTGGGGGGCGCTCAAAAGCGTGACCAAGAGCTGGCTGGGCAGCGACAACGCCTTCAAGAACCTGCGGGCCATGCTCAAGACCAACCAGAACGGCGGTTTCGACTGCCCCGGCTGTGCCTGGGGCGA < 1:47040/150‑1 GAACCTGCGGGCCATGCTCAAGACCAACCAGAACGGCGGTTTCGACTGCCCCGGCTGTGCCTGGGGCGA > 1:154923/1‑69 GAACCTGCGGGCCATGCTCAAGACCAACCAGAACGGCGGTTTCGACTGCCCCGACTGTGCCTGGGGCGA < 2:154923/69‑1 GAACGGCGGTTTCGACTGCCCCGGCTGTGCCTGGGGCGAGTCGAAACCGCCGTTCTGGTTGGTCTTGAGCATGGCCCGCAGGTTCTTGAAGGCGTTGTC < 1:280248/99‑1 GAACGGCGGTTTCGACTGCCCCGGCTGTGCCTGGGGCGAGTCGAAACCGCCGTTCTGGTTGGTCTTGAGCATGGCCCGCAGGTTCTTGAAGGCGTTGTC > 2:280248/1‑99 GACTGCCCCGGCTGTGCCTGGGGC‑AGTCGAAACCGCCGTTCTGGTTGGTCTTGAGCATGGCCCGCAGGTTCTTGAAGGCGTTGTCGCTGCCCAGCCAGCTCTTGGTCACGCTTTTGAGCGCCCCCCAGCCGGCAGCGGCGCCCTTGTA < 1:492052/148‑1 GACTGCCCCGGCTGTGCCTGGGGC‑AGTCGAAACCGCCGTTCTGGTTGGTCTTGAGCATGGCCCGCAGGTTCTTGAAGGCGTTGTCGCTGCCCAGCCAGCTCTTGGTCACGCTTTTGAGCGCCCCCCAGCCGGCAGCGGCGCCCTTGTA > 2:492052/1‑148 ACTGCCCCGGCTGTGCCTGGGGCGAGTCGAAACCGCCGTTCTGGTTGGTCTTGAGCATGGCCCGCAGGTTCTTGAAGGCGTTGTCGCTGCCCAGCCAGCTCTTGG < 1:315219/105‑1 ACTGCCCCGGCTGTGCCTGGGGCGAGTCGAAACCGCCGTTCTGGTTGGTCTTGAGCATGGCCCGCAGGTTCTTGAAGGCGTTGTCGCTGCCCAGCCAGCTCTTGG > 2:315219/1‑105 GGCTGTGCCTGGGGC‑AGTCGAAACCGCCGTTCTGGTTGGTCTTGAGCATGGCCCGCAGGTTCTTGAAGGCGTTGTCGCTGCCCA < 1:216776/84‑1 GGCTGTGCCTGGGGC‑AGTCGAAACCGCCGTTCTGGTTGGTCTTGAGCATGGCCCGCAGGTTCTTGAAGGCGTTGTCGCTGCCCA > 2:216776/1‑84 GAAACCGCCGTTCTGGTTGGTCTTGAGCATGGCCCGCAGGTTCTTGAAGGCGTTGTCGCTGCCCAGCCAGCTCTTGGTCACGCTTTTGAGCGCCCCCCAGCCGGCAGCGGCGCCCTTGTAGTCCCTGATGTGTTCGTCCTGGCTCATGCG > 1:523314/1‑150 GGACTACAAGGGCGCCGCTGCCGGCTGGGGGGCGCTCAAAAGCGTGACCAAGAGCTGGCTGGGCAGCGACAACGCCTTCAAGAACCTGCGGGCCATGCTCAAGACCAACCAGAACGGCGGTTTCGACTGCCCCGGCTGTGCCTGGGGCGAGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5216730‑5216577‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtcgAAACCGCCGTTCTGGTTGGTCTTGAGCATGGCCCGCAGGTTCTTGAAGGCGTTGTCGCTGCCCAGCCAGCTCTTGGTCACGCTTTTGAGCGCCCCCCAGCCGGCAGCGGCGCCCTTGTAGTCCCTGATGTGTTCGTCCTGGCTCATGCG > NC_002947/5216608‑5216756 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |