| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3989028 = | 19 (0.750) | 5 (0.200) | 4/262 | 2.7 | 21.6% | coding (1502/2085 nt) | oplA | 5‑oxoprolinase A |
| ? | NC_002947 | 3989083 = | 18 (0.740) | coding (1557/2085 nt) | oplA | 5‑oxoprolinase A | |||||
TGGTGCGCCTGGCCGAAGAAATTGGCATGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTG‑TCGA‑‑TGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCACTACACCCTGGAGATGCGC > NC_002947/3988914‑3989176 | tggtgCGCCTGGCCGAAGAAATTGGCATGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTG‑TCGA‑‑TGCGCCTGGACGCCGGGCACGTCGAcc < 1:525592/150‑1 (MQ=255) ggtgCGCCTGGCCGAAGAAATTGGCATGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTG‑TCGA‑‑TGCGCCTGGACGCCGGGCACGTCGACCt < 1:471726/150‑1 (MQ=255) ccaggtagcgcatctccagggtgtagtggcaactgctggcctggtcgccaaagccgtcttcgcgcaggttggcaaggccttgctgacgtagttcggcgaggGCCTG‑TCGA‑‑TGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCaa < 1:164404‑M1/49‑1 (MQ=255) gtagcgcatctccagggtgtagtggcaactgctggcctggtcgccaaagccgtcttcgcgcaggttggcaaggccttgctgacgtagttcggcgaggGCCTGGTTGAGTTGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAAc > 1:341539‑M1/98‑150 (MQ=255) gtagcgcatctccagggtgtagtggcaactgctggcctggtcgccaaagccgtcttcgcgcaggttggcaaggccttgctgacgtagttcggcgaggGCCTG‑TCGA‑‑TGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAg > 2:164404‑M1/98‑150 (MQ=255) aaaTTGGCATGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTG‑TCGA‑‑TGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAgg < 2:56325/150‑1 (MQ=255) tGGCATGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTG‑TCGA‑‑TGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCt < 1:597386/150‑1 (MQ=255) atctccagggtgtagtggcaactgctggcctggtcgccaaagccgtcttcgcgcaggttggcaaggccttgctgacgtagttcggcgaggGCCTG‑TCGA‑‑TGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAAc < 1:550099‑M1/50‑1 (MQ=255) atctccagggtgtagtggcaactgctggcctggtcgccaaagccgtcttcgcgcaggttggcaaggccttgctgacgtagttcggcgaggGCCTG‑TCGA‑‑TGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAAc > 2:550099‑M1/91‑140 (MQ=255) cacaCCGTGCTGATCCCCAAGGTGGCCTCGGGCTCGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTG‑TCGA‑‑TGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGaa > 2:175562/1‑150 (MQ=255) cccAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTG‑TCGA‑‑TGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTc < 2:606561/129‑1 (MQ=255) cccAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTG‑TCGA‑‑TGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTc > 1:606561/1‑129 (MQ=255) cccAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATACTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTG‑TCGA‑‑TGCGCCTGGACGCCCGGCCCGTCGGCCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGc > 2:174243/1‑150 (MQ=255) ccAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTG‑TCGA‑‑TGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGcc > 1:313796/1‑150 (MQ=255) cTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTG‑TCGA‑‑Tg > 2:112832/1‑70 (MQ=255) cTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTG‑TCGA‑‑Tg < 1:112832/70‑1 (MQ=255) cTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTG‑TCGA‑‑TGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCt > 2:280690/1‑150 (MQ=255) ttGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTG‑TCGA‑‑TGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGaa > 1:380859/1‑150 (MQ=255) tgCGTTCGGCCAGATCCTGTCCGACGTTCGCTACGACCAGCTCACCAGCCTG‑TCGA‑‑TGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACgg > 1:551768/1‑150 (MQ=255) gTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTG‑TCGA‑‑TGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCtt > 2:540865/1‑150 (MQ=255) cAGCTCACCAGCCTG‑TCGC‑‑TGCGCCTGGACGCCGGGCACTTCGACCTGGGGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCACTACACCCTg < 2:380859/150‑1 (MQ=255) gCTCACCAGCCTG‑TCGA‑‑TGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCACTACACCCTGga < 1:280690/150‑1 (MQ=255) cTCACCAGCCTG‑TCGA‑‑TGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCCACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCACTACACCCTGgag < 2:551768/150‑1 (MQ=255) aGCCTG‑TCGA‑‑TGCACCGGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCACTACACCCTGGAGATgcgc > 2:8432/1‑150 (MQ=255) | TGGTGCGCCTGGCCGAAGAAATTGGCATGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTG‑TCGA‑‑TGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCACTACACCCTGGAGATGCGC > NC_002947/3988914‑3989176 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |