New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 582803 = | 108 (1.160) | 6 (0.070) | 5/242 | NT | 5.5% | coding (666/1923 nt) | selB | selenocysteyl‑tRNA‑specific translation elongation factor |
? | NC_002947 | 582824 = | 100 (1.110) | coding (687/1923 nt) | selB | selenocysteyl‑tRNA‑specific translation elongation factor |
TCCACCCGAACACTGGGCGCATGCAACCATTCGGGCACCAGCCAGTCGCCCCGGTGCACCTGCTCCACGGCCAGGCGCTCGGCAGCGATGTTCAGCGCCACCCGTTGGCCTGCTTCTGCCACCAACGCGGCCTGGTTCTGCGCATGCAGACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/582955‑582803 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaGGCCGCGTTGGTGGCAGAAGCAGGCCAACGGGTGGCGCTGAACATCGCTGCCGAGCGCCTGGCCGTGGAGCAGGTGCACCGGGGCGACTGGCTGGTGCCCGAATGGTTGCATGCGCCCAGTGTTCGGGTGGATATCGAGCTGTACCTGT > NC_002947/582824‑582972 TCCACCCGAACACTGGGCGCATGCAACCATTCGGGCACCAGCCAGTCGCCCCGGTGCACCTGCTCCACGGCCAGGCGCTCGGCAGCGATGTTCAGCGCCACCCGTTGGCCTGCTTCTGCCACCAACGCGGCCTGGTTCTGCGCATGCAGA < 2:1427598/150‑1 CCACCCGAACACTGGGCGCATGCAACCATTCGGGCACCAGCCAGTCGCCCCGGTGCACCTGCTCCACGGCCAGGCGCTCGGCAGCGATGTTCAGCGCCACCCGTTGGCCTGCTTCTGCCACCAACGCGGCCTGGTTCTGCGCATGCAGAC < 2:1431965/150‑1 CACCCGAACACTGGGCGCATGCAACCATTCGGGCACCAGCCAGTCGCCCCGGTGCACCTGCTCCACGGCCAGGCGCTCGGCAGCGATGTTCAGCGCCACCCGTTGGCCTGCTTCTGCCACCAACGCGGCCTGGTTCTGCGCATGCAGACC > 1:35483/1‑150 ACCCGAACACTGGGCGCATGCAACCATTCGGGCACCAGCCAGTCGCCCCGGTGCACCTGCTCCACGGCCAGGCGCTCGGCAGCGATGTTCAGCGCCACCCGTTGGCCTGCTTCTGCCACCAACGCGGCCTGGTTCTGCGCATGCAGACCA > 1:1203263/1‑150 ACCCGAACACTGGGCGCATGCAACCATTCGGGCACCAGCCAGTCGCCCCGGTGCACCTGCTCCACGGCCAGGCGCTCGGCAGCGATGTTCAGCGCCACCCGTTGGCCTGCTTCTGCCACCAACGCGGCCTGGTTCTGCGCATGCAGACCA > 1:5086/1‑150 ACCAACGCGGCCTGGTTCTGCGCATGCAGACCAGGCCGCGTTGGTGGCAGAAGCAGGCCAACGGGTGGCGCTGAA < 1:1260791/75‑1 ACCAACGCGGCCTGGTTCTGCGCATGCAGACCAGGCCGCGTTGGTGGCAGAAGCAGGCCAACGGGTGGCGCTGAA > 2:1260791/1‑75 CTGGTTCTGCGCATGCAGACCAGGCCGCGTTGGTGGCAGAAGCAGGCCAACGGGTGGCGCTGAA > 1:22359/1‑64 CTGGTTCTGCGCATGCAGACCAGGCCGCGTTGGTGGCAGAAGCAGGCCAACGGGTGGCGCTGAA < 2:22359/64‑1 TGGTTCTGCGCATGCAGACCAGGCCGCGTTGGTGGCAGAAGCAGGCCAACGGGTGGCGCTGAACATCGCTGCCGAGCGCCTGGCCGTGGAGCAGGTGCACCGGGGCGACTGGCTGGTGCCCGAATGGTTGCATGCGCCCAGTGTTCGGGT > 1:1078249/1‑150 GTTCTGCGCATGCAGACCAGGCCGCGTTGGTGGCAGAAGCAGGCCAACGGGTGGCGCTGAACATCGCTGCCGAGCGCCTGGCCGTGGAGCAGGTGCACCGGGGCGACTGGCTGGTGCCCGAATGGTTGCATGCGCCCAGTGTTCGGGTGG > 1:705183/1‑150 ACCAGGCCGCGTTGGTGGCAGAAGCAGGCCAACGGGTGGCGCTGAACATCGCTGCCGAGCGCCTGGCCGTGGAGCAGGTGCACCGGGGCGACTGGCTGGTGCCCGAATGGTTGCATGCGCCCAGTGTTCGGGTGGATATCGAGCTGTACC > 1:1847904/1‑150 CCAGGCCGCGTTGGTGGCAGAAGCAGGCCAACGGGTGGCGCTGAACATCGCTGCCGAGCGCCTGGCCGTGGAGCAGGTGCACCGGGGCGACTGGCTGGTGCCCGAATGGTTGCATGCGCCCAGTGTTCGGGTGGATATCGAGCTGTACCT < 1:495510/150‑1 CCAGGCCGCGTTGGTGGCAGAAGCAGGCCAACGGGTGGCGCTGAACATCGCTGCCGAGCGCCTGGCCGTGGAGCAGGTGCACCGGGGCGACTGGCTGGTGCCCGAATGGTTGCATGCGCCCAGTGTTCGGGTGGATATCGAGCTGTACCT < 2:1486518/150‑1 CCAGGCCGCGTTGGTGGCAGAAGCAGGCCAACGGGTGGCGCTGAACATCGCTGCCGAGCGCCTGGCCGTGGAGCAGGTGCACCGGGGCGACTGGCTGGTGCCCGAATGGTTGCATGCGCCCAGTGTTCGGGTGGATATCGAGCTGTACCT < 2:1834256/150‑1 AGGCCGCGTTGGTGGCAGAAGCAGGCCAACGGGTGGCGTTGAACATCGCTGCCGAGCGCCTGGCCGTGGAGCAGGTGCACCGGGGCGACTGGCTGGTGCCCGAATGGTTGCATGCGCCCAGTGTTCGGGTGGATATCGAGCTGTACCTGT > 1:2232389/1‑150 TCCACCCGAACACTGGGCGCATGCAACCATTCGGGCACCAGCCAGTCGCCCCGGTGCACCTGCTCCACGGCCAGGCGCTCGGCAGCGATGTTCAGCGCCACCCGTTGGCCTGCTTCTGCCACCAACGCGGCCTGGTTCTGCGCATGCAGACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/582955‑582803 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaGGCCGCGTTGGTGGCAGAAGCAGGCCAACGGGTGGCGCTGAACATCGCTGCCGAGCGCCTGGCCGTGGAGCAGGTGCACCGGGGCGACTGGCTGGTGCCCGAATGGTTGCATGCGCCCAGTGTTCGGGTGGATATCGAGCTGTACCTGT > NC_002947/582824‑582972 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |