| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 941373 | 117 (1.250) | 6 (0.070) | 6/244 | NT | 5.4% | coding (4252/18933 nt) | PP_0806 | surface adhesion protein |
| ? | NC_002947 | = 941406 | 98 (1.080) | coding (4219/18933 nt) | PP_0806 | surface adhesion protein | |||||
GCCCGGTTCGGCACGGCCGGTGACCACGCTGCCGTCGGCATTGATCACCAGTTCGGTCGGTGCGGCAGGGGCGGTGATATCCGGTGCGGTGATTTGGGTGGGCAGCGAGGAAACACCGCCGTCATCAATGGCCACCACGTCCAGCAGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/941224‑941373‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcACCGTAACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTGGCCATTGATGACGGCGGTGTTTCCTCGCTGCCCACCCAAATCACCGCACCGGATATCACCGCCCCTGCCGCACCGACCGAACTGGTGATCAATGCCGA < NC_002947/941406‑941258 GCCCGGTTCGGCACGGCCGGTGACCACGCTGCCGTCGGCATTGATCACCAGTTCGGTCGGTGCGGCAGGGGCGGTGATATCCGGTGCGGTGATTTGGGTGGGCAGCGAGGAAACACCGCCGTCATCAATGGCCACCACGTCCAGCAGTTC > 2:519383/1‑150 TTGATCACCAGTTCGGTCGGTGCGGCAGGGGCGGTGATATCCGGTGCGGTGATTTGGGTGGGCAGCGAGGAAACACCGCCGTCATCAATGGCCACCACGTCCAGCAGTT > 1:176034/1‑109 TTGATCACCAGTTCGGTCGGTGCGGCAGGGGCGGTGATATCCGGTGCGGTGATTTGGGTGGGCAGCGAGGAAACACCGCCGTCATCAATGGCCACCACGTCCAGCAGTT < 2:176034/109‑1 GTCGGTGCGGCAGGGGCGGTGATATCCGGTGCGGTGATTTGGGTGGGCAGCGAGGAAACACCGCCGTCATCAATGGCCACCACGTCCAGCAGTTCGCCGTCACCCTCGACCCGGCCCAGACCAACGGCGAAC < 1:1326039/132‑1 GTCGGTGCGGCAGGGGCGGTGATATCCGGTGCGGTGATTTGGGTGGGCAGCGAGGAAACACCGACGTCATCAATGGCCACCACGTCCAGCAGTTCGCCGTCACCCTCGACCCGGCCCAGACCAACGGCGAAC > 2:1326039/1‑132 GCGGTGATATCCGGTGCGGTGATTTGGGTGGGCAGCGAGGAAACACCGCCGTCATCAATGGCCACCACGTCCAGCAGTTCACCGTAACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTG > 1:431384/1‑122 GCGGTGATATCCGGTGCGGTGATTTGGGTGGGCAGCGAGGAAACACCGCCGTCATCAATGGCCACCACGTCCAGCAGTTCACCGTAACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTG < 2:431384/122‑1 AGGAAACACCGCCGTCATCAATGGCCACCACGTCCAGCAGTTCACCGTAACCCTCGACCCGCCTCAGGCCAACGGCGAA < 1:2147145/79‑1 AGGAAACACCGCCGTCATCAATGGCCACCACGTCCAGCAGTTCACCGTAACCCTCGACCCGCCTCAGGCCAACGGCGAA > 2:2147145/1‑79 TTCACCGTAACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTGGCCATTGATGACGGCGGTGTTTCCTCGCTGCCCACCCAAATCACCGCACCGGATATCACCGCCCCTGCCGCACCGACCGAACTGGTGATCAATGCC > 2:287698/1‑150 TCACCGTAACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTGGCCATTGATGACGGCGGTGTTTCCTCGCTGCCCACCCAAATCACCGCACCGGATATCACCGCCCCTGCCGCACCGACCGAACTGGTGATCAATGCCG > 1:1249140/1‑150 CACCGTAACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTGGCCATTGATGACGGCGGTGTTTCCTCGCTGCCCACCCAAATCACCGCACCGGATATCACCGCCCCTGCCGCACCGACCGAACTGGTGATCAATGCCGA < 2:2061797/150‑1 GCCCGGTTCGGCACGGCCGGTGACCACGCTGCCGTCGGCATTGATCACCAGTTCGGTCGGTGCGGCAGGGGCGGTGATATCCGGTGCGGTGATTTGGGTGGGCAGCGAGGAAACACCGCCGTCATCAATGGCCACCACGTCCAGCAGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/941224‑941373‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcACCGTAACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTGGCCATTGATGACGGCGGTGTTTCCTCGCTGCCCACCCAAATCACCGCACCGGATATCACCGCCCCTGCCGCACCGACCGAACTGGTGATCAATGCCGA < NC_002947/941406‑941258 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |