New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2408436 = | 94 (1.010) | 6 (0.070) | 6/234 | NT | 6.6% | coding (172/1566 nt) | PP_2111 | aerotaxis receptor |
? | NC_002947 | 2408461 = | 83 (0.950) | coding (147/1566 nt) | PP_2111 | aerotaxis receptor |
CCGATTACCCAGAGAGAACGGACTTTCCCAGCCCAGCAGCGGTTGATCTCCACTACCAACGCCAAGGGTGTGATCACCTACTGCAACGATGCCTTTATCGAAATCAGTGGTTTCACCCGCGAGGAGCTGACGGGCGCACCGCACAACCTGGTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2408592‑2408436 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcgccCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGATCAACCGCTGCTGGGCTGGGAAAGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATG > NC_002947/2408461‑2408608 CCGATTACCCAGAGAGAACGGACTTTCCCAGCCCAGCAGCGGTTGATCTCCACTACCAACGCCAAGGGTGTGATCACCTACTGCAACGATGCCTTTATCGAAATCAGTGGTTTCACCCGCGAGGAGCTGACGGGCGCACCGCACAACCTG < 1:964701/150‑1 TTACCCAGAGAGAACGGACTTTCCCAGCCCAGCAGCGGTTGATCTCCACTACCAACGCCAAGGGTGTGATCACCTACTGCAACGATGCCTTTATCGAAATCAGTGGTTTCACCCGCGAGGAGCTGACGGGCGCACCGCACAACCTGGTGC < 2:1154781/150‑1 ACCCAGAGAGAACGGACTTTCCCAGCCCAGCAGCGGTTGATCTCCACTACCAACGCCAAGGGTGTGATCACCTACTGCAACGATGCCTTTATCGAAATCAGTGGTTTCACCCGCGAGGAGCTGACGGGCGCACCGCACAACCTGGTGCGC < 1:878059/150‑1 TCCACTACCAACGCCAAGGGTGTGATCACCTACTGCAACGATGCCTTTATCGAAATCAGTGGTTTCACCCGCGAGGAGCTGACGGGCGCACCGCACAACCTGG > 1:493185/1‑103 TCCACTACCAACGCCAAGGGTGTGATCACCTACTGCAACGATGCCTTTATCGAAATCAGTGGTTTCACCCGCGAGGAGCTGACGGGCGCACCGCACAACCTGG < 2:493185/103‑1 ACGGGCGCACCGCACAACCTGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGA > 1:692764/1‑87 ACGGGCGCACCGCACAACCTGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGA < 2:692764/87‑1 GGGCGCACCGCACAACCTGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGATCAACCGCTGCTGGGCTG > 1:2334997/1‑130 GGGCGCACCGCACAACCTGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGATCAACCGCTGCTGGGCTG < 2:2334997/130‑1 GCGCACCGCACAACCTGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAG > 1:1038859/1‑64 GCGCACCGCACAACCTGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAG < 2:1038859/64‑1 GGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGATCAACCGCTGCTGGGCTGGGAAAGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTA < 1:581969/150‑1 CCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGATCAACCGCTGCTGGGCTGGGAAAGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATG < 1:1318504/150‑1 CCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGATCAACCGCTGCTGGGCTGG < 1:2258098/106‑1 CCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGATCAACCGCTGCTGGGCTGG > 2:2258098/1‑106 CCGATTACCCAGAGAGAACGGACTTTCCCAGCCCAGCAGCGGTTGATCTCCACTACCAACGCCAAGGGTGTGATCACCTACTGCAACGATGCCTTTATCGAAATCAGTGGTTTCACCCGCGAGGAGCTGACGGGCGCACCGCACAACCTGGTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2408592‑2408436 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcgccCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGATCAACCGCTGCTGGGCTGGGAAAGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATG > NC_002947/2408461‑2408608 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |