New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3403942 =	71 (0.760)	5 (0.060)	3/238	NT	7.2%	coding (317/360 nt)	PP_3014	hypothetical protein
	?	NC_002947	3403962 =	62 (0.700)					coding (337/360 nt)	PP_3014	hypothetical protein

AGCTATCCGAGCCGAATGGAGGCGCAGGTGAAGTGCGAACATTTGAACAAGCGGGATGAGTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3404096‑3403942 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGATAGCTGGGTTTGAGCCG  >  NC_002947/3403962‑3404108                                                                                                                                                                                                                                                                                                                 AGCTATCCGAGCCGAATGGAGGCGCAGGTGAAGTGCGAACATTTGAACAAGCGGGATGAGTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTC                                                                                                                                                          >  2:26747/1‑150   CTATCCGAGCCGAATGGAGGCGCAGGTGAAGTGCGAACATTTGAACAAGCGGGATGAGTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGC                                                                                                                                                        <  1:1267069/150‑1     ATCCGAGCCGAATGGAGGCGCAGGTGAAGTGCGAACATTTGAACAAGCGGGATGAGTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGCta                                                                                                                                                      <  1:442584/150‑3     ATCCGAGCCGAATGGAGGCGCAGGTGAAGTGCGAACATTTGAACAAGCGGGATGAGTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGCCA                                                                                                                                                      <  1:2310467/150‑1                          AGGTGAAGTGCGAACATTTGAACAAGCGGGATGAGTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCCGACAGCCTGGCG‑ACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGA                                                                                                                                 <  1:1134867/150‑1                                     GAACATTTGAACAAGCGGGATGAGTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGCCA                                                                                                                                                      <  1:2094185/118‑1                                     GAACATTTGAACAAGCGGGATGAGTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGCCA                                                                                                                                                      >  2:2094185/1‑118                                                            GTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGCCA                                                                                                                                                      >  1:1950598/1‑95                                                            GTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGCCA                                                                                                                                                      <  2:1950598/95‑1                                                                GGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGCCA                                                                                                                                                      >  1:1486221/1‑91                                                                GGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGCCA                                                                                                                                                      <  2:1486221/91‑1                                                                                            AACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCGACAAGTT‑ACGCCAGGCTGTCAGGCAATG                                                                                                                                       <  2:1000554/78‑1                                                                                            AACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCGACAAGTT‑ACGCCAGGCTGTCAGGCAATG                                                                                                                                       <  2:1000616/78‑1                                                                                            AACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCGACAAGTT‑ACGCCAGGCTGTCAGGCAATG                                                                                                                                       >  1:1000616/1‑78                                                                                            AACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑ACAAGTTACGCCAGGCTGTCAGGCAATG                                                                                                                                       >  1:1000554/1‑78                                                                                                                                                       CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGATAGCTGGGTTTGAG     <  1:1671242/150‑1                                                                                                                                                        GCCAGGCTGTCAGGCAATGCCTGGCTTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGATAGCTGGGTTTGAGC    >  2:1625075/1‑150                                                                                                                                                          ctGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGATAGCTGGGTTTGAGCCG  >  2:11205/3‑150                                                                                                                                                                                                                                                                                                                 AGCTATCCGAGCCGAATGGAGGCGCAGGTGAAGTGCGAACATTTGAACAAGCGGGATGAGTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3404096‑3403942 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGATAGCTGGGTTTGAGCCG  >  NC_002947/3403962‑3404108

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.