New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3403942 =	71 (0.760)	5 (0.060)	3/238	NT	7.2%	coding (317/360 nt)	PP_3014	hypothetical protein
	?	NC_002947	3403962 =	62 (0.700)					coding (337/360 nt)	PP_3014	hypothetical protein

CCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGATAGCTGGGTTTGAGCCG  >  NC_002947/3403813‑3404108                                                                                                                                                       |                                                                                                                                                   ccACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAgg                                                                                                                                                    >  1:1009194/1‑150 (MQ=255)     gCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑TGCCAGGCTGt                                                                                                                                                >  1:366502/1‑150 (MQ=255)       aGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCa                                                                                                                                              >  1:97629/1‑150 (MQ=255)       aGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGGGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAATTTA‑CGCCACGCTGTCa                                                                                                                                              >  2:1225022/1‑150 (MQ=255)        gAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAg                                                                                                                                             >  1:196863/1‑150 (MQ=255)              gATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATg                                                                                                                                       >  1:18070/1‑150 (MQ=255)               aTAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGc                                                                                                                                      >  2:886078/1‑150 (MQ=255)                tAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGcc                                                                                                                                     <  2:97629/150‑1 (MQ=255)                 aGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCt                                                                                                                                    <  2:1215021/150‑1 (MQ=255)                  gCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTg                                                                                                                                   <  1:1735473/150‑1 (MQ=255)                    ccACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGa                                                                                                                                 <  1:1441569/150‑1 (MQ=255)                     aggtgaagtgcgaacatttgaacaagcgggatgagttggggtaactgcaggcgatcggggcggcacaacccgctcgggtcactgattcaatccaggcattgcccgacagcctggcgacaagttacgccagGCTGTCAGGCAATGCCTGGa                                                                                                                                 <  1:1134867‑M2/20‑1 (MQ=255)                        ggCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGa                                                                                                                             <  1:984304/150‑1 (MQ=255)                        ggCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGa                                                                                                                             <  1:984327/150‑1 (MQ=255)                            aCCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCa                                                                                                                         <  1:1165903/150‑1 (MQ=255)                            aCCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCa                                                                                                                         <  2:1928586/150‑1 (MQ=255)                             ccGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAg                                                                                                                        <  1:1866799/150‑1 (MQ=255)                             ccGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAg                                                                                                                        <  1:2080247/150‑1 (MQ=255)                              cGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCCTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGt                                                                                                                       <  2:1261496/150‑1 (MQ=255)                                  tCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGAcc                                                                                                                   >  1:215292/1‑150 (MQ=255)                                       gcgcCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGc                                                                                                              <  2:18070/150‑1 (MQ=255)                                           cAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGt                                                                                                          >  2:1032967/1‑150 (MQ=255)                                                gcCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTgc                                                                                                     <  2:1009194/150‑1 (MQ=255)                                                gcCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTgc                                                                                                     >  1:734185/1‑150 (MQ=255)                                                        aaGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGa                                                                                             >  2:151466/1‑150 (MQ=255)                                                                 tgtgCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCa                                                                                    <  1:1032967/150‑1 (MQ=255)                                                                     cTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTtgt                                                                                                       >  2:94470/1‑127 (MQ=255)                                                                     cTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTtgt                                                                                                       <  1:94470/127‑1 (MQ=255)                                                                     cTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTa                                                                                >  2:1221696/1‑150 (MQ=255)                                                                       tGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTAcc                                                                              <  1:151466/150‑1 (MQ=255)                                                                           gtgGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCaa                                                                          <  1:609910/150‑1 (MQ=255)                                                                              gTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTATAAGGTCAGCTTTCTGTCTGGCGACAAGTTA‑CGGTATGCTGTCAGGCTACTCCTGGATTGAATTAGTTACCCGAGCGGGTTGTGCCGCCCCGATCGACTGCTGCGACTCCAACTc                                                                       >  1:1355711/1‑150 (MQ=255)                                                                                 gACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATc                                                                    >  2:1874085/1‑150 (MQ=255)                                                                                  aCGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCTACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATcc                                                                   >  1:2295222/1‑150 (MQ=255)                                                                                      tCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCt                                                               >  2:2283424/1‑150 (MQ=255)                                                                                       cACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCtt                                                              <  2:1493820/150‑1 (MQ=255)                                                                                       aacccgctcgggtcactgattcaatccaggcattgcctgacagcctggcgacaagttacgccagGCTGTCAGGCAATg                                                                                                                                       >  1:1000554‑M2/65‑78 (MQ=255)                                                                                       aacccgctcgggtcactgattcaatccaggcattgcctgacagcctggcgacaagttacgccagGCTGTCAGGCAATg                                                                                                                                       >  1:1000616‑M2/65‑78 (MQ=255)                                                                                       aacccgctcgggtcactgattcaatccaggcattgcctgacagcctggcgacaagttacgccagGCTGTCAGGCAATg                                                                                                                                       <  2:1000616‑M2/14‑1 (MQ=255)                                                                                       aacccgctcgggtcactgattcaatccaggcattgcctgacagcctggcgacaagttacgccagGCTGTCAGGCAATg                                                                                                                                       <  2:1000554‑M2/14‑1 (MQ=255)                                                                                          gAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCTCCTGCAGTTACCCCAACTCATCCCGCTTGtt                                                           >  2:1924849/1‑150 (MQ=255)                                                                                              gCAGCCGCGCGAGCTTTTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGACTCGGTGACCCGAGCGGGTTGTGCCGACGAGGCCGCCTGCAGTTACCCCTTCGCAGCCCGTTTGTTCaaa                                                       <  2:2449883/150‑1 (MQ=255)                                                                                               cAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAAt                                                      <  2:215292/150‑1 (MQ=255)                                                                                                   cgcgcgACCTTCTACAAGCGCAGCTTTCTCGCTGGCGCCCAGTTA‑AGCCAGGCTGTCAGGCAATGCCTGGACTCAATCAGTGCCCAGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTc                                                  <  1:624008/150‑1 (MQ=255)                                                                                                      gcgACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCa                                               <  2:196863/150‑1 (MQ=255)                                                                                                      gcgACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCa                                               >  2:2202933/1‑150 (MQ=255)                                                                                                        gACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACt                                             >  1:1630130/1‑150 (MQ=255)                                                                                                            ttCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCg                                                 >  1:38064/1‑142 (MQ=255)                                                                                                            ttCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCg                                                 <  2:38064/142‑1 (MQ=255)                                                                                                            ttCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCaa                                         >  1:818239/1‑149 (MQ=255)                                                                                                              tccaggcattgcctgacagcCTGGCGTAACTTGT‑CGCCAGGCTGTCGGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCt                                       <  1:1134867‑M1/130‑1 (MQ=255)                                                                                                                 cAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTgcg                                    >  1:780468/1‑150 (MQ=255)                                                                                                                  aaGGGCAGCTTTCTGTCTGGCTACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTgcgc                                   <  2:2295222/150‑1 (MQ=255)                                                                                                                    gggCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCgg                                                                                                            <  1:533243/75‑1 (MQ=255)                                                                                                                    gggCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCgg                                                                                                            >  2:533243/1‑75 (MQ=255)                                                                                                                    cattgcctgacagcCTGGCGTAACTTGT‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGtt                                                                                                         >  1:1000554‑M1/15‑78 (MQ=255)                                                                                                                    cattgcctgacagcCTGGCGT‑AACTTGTCGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGtt                                                                                                         <  2:1000554‑M1/64‑1 (MQ=255)                                                                                                                    cattgcctgacagcCTGGCGT‑AACTTGTCGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGtt                                                                                                         <  2:1000616‑M1/64‑1 (MQ=255)                                                                                                                    cattgcctgacagcCTGGCGT‑AACTTGTCGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGtt                                                                                                         >  1:1000616‑M1/15‑78 (MQ=255)                                                                                                                      gCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTcc                               <  2:1630130/150‑1 (MQ=255)                                                                                                                       cAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCa                              >  1:941680/1‑150 (MQ=255)                                                                                                                        aGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCAt                             >  1:270474/1‑150 (MQ=255)                                                                                                                          cTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCTCCGATCGCCTGCa                                                                                    >  1:1333980/1‑93 (MQ=255)                                                                                                                          cTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCa                                                                                    <  2:1333980/93‑1 (MQ=255)                                                                                                                          cTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTc                           <  1:2283424/150‑1 (MQ=255)                                                                                                                          cTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTc                           <  1:2365239/150‑1 (MQ=255)                                                                                                                          cTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTc                           >  1:26747/1‑150 (MQ=255)                                                                                                                          cTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTc                           >  1:824043/1‑150 (MQ=255)                                                                                                                          cTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGCGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTc                           >  1:1173465/1‑150 (MQ=255)                                                                                                                                gtctgGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTAc                                                                               <  1:1124047/92‑1 (MQ=255)                                                                                                                                gtctgGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTAc                                                                               >  2:1124047/1‑92 (MQ=255)                                                                                                                                 tctgGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCgg                    >  2:340232/1‑150 (MQ=255)                                                                                                                                   taGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGAt                  <  1:442584‑M1/148‑1 (MQ=255)                                                                                                                                   TGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTAccc                                                                             <  2:1486221‑M1/91‑1 (MQ=255)                                                                                                                                   TGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTAccc                                                                             >  1:1486221‑M1/1‑91 (MQ=255)                                                                                                                                   TGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAAc                                                                         >  1:1950598‑M1/1‑95 (MQ=255)                                                                                                                                   TGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAAc                                                                         <  2:1950598‑M1/95‑1 (MQ=255)                                                                                                                                   TGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTc                                                  <  1:2094185‑M1/118‑1 (MQ=255)                                                                                                                                   TGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTc                                                  >  2:2094185‑M1/1‑118 (MQ=255)                                                                                                                                   TGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGAt                  <  1:2310467‑M1/150‑1 (MQ=255)                                                                                                                                     GCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGATAg                <  1:1267069‑M1/150‑1 (MQ=255)                                                                                                                                       GACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGATAGCt              >  2:26747‑M1/1‑150 (MQ=255)                                                                                                                                         cAAGTTA‑GGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGTGCGGGTTGTGCCGCCCCGATCGCCTGCAGTCACCCCAACTCATCCCGCTTGTCCAAATGTTCGCACTTCACCTGCGCCTCCATGCGGCTCGGATAGCTgg            <  2:1226347/150‑1 (MQ=255)                                                                                                                                         cAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGCGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGCTAGCTgg            <  2:1173465/150‑1 (MQ=255)                                                                                                                                             ttA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGATAGCTGGGttt        >  2:706185/1‑150 (MQ=255)                                                                                                                                             ttA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGATAGCTGGGttt        >  2:1723636/1‑150 (MQ=255)                                                                                                                                                 cgccagGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGATAGCTGGGTTTGAg     <  1:1671242‑M2/144‑1 (MQ=255)                                                                                                                                                  gccagGCTGTCAGGCAATGCCTGGCTTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGATAGCTGGGTTTGAGc    >  2:1625075‑M2/6‑150 (MQ=255)                                                                                                                                                    ctgGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGATAGCTGGGTTTGAGCCg  >  2:11205‑M2/4‑150 (MQ=255)                                                                                                                                                       |                                                                                                                                                   CCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTA‑CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGATAGCTGGGTTTGAGCCG  >  NC_002947/3403813‑3404108

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.