New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5546950	85 (0.910)	6 (0.070)	6/240	NT	6.5%	coding (2152/2574 nt)	rnr	exoribonuclease R
	?	NC_002947	= 5546982	91 (1.020)					coding (2120/2574 nt)	rnr	exoribonuclease R

CTTTTTCAGCAACCGGTGCGGCGCCACGCTGCTTGCGGCCGATCGGTGCGGCGAGGGTCTTTTCCGACACTTCGAAGTCGATCTTGCGCTCATCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5546800‑5546950 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGCAGCTTCCGCTTGGGCGACACCATCGAAGTCAAGGTCATGCGTGTTGATCTGGATGAGCGCAAGATCGACTTCGAAGTGTCGGAAAAGACCCTCGCCGCACCGATCGGCCGC  <  NC_002947/5546982‑5546834                                                                                                                                                                                                                                                                                                              CTTTTTCAGCAACCGGTGCGGCGCCACGCTGCTTGCGGCCGATCGGTGCGGCGAGGGTCTTTTCCGACACTTCGAAGTCGATCTTGCGCTCATCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGAC                                                                                                                                                        >  1:1406201/1‑150  TTTTTCAGCAACCGGTGCGGCGCCACGCTGCTTGCGGCCGATCGGTGCGGCGAGGGTCTTTTCCGACACTTCGAAGTCGATCTTGCGCTCATCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGACC                                                                                                                                                       >  1:576159/1‑150  TTTTTCAGCAACCGGTGCGGCGCCACGCTGCTTGCGGCCGATCGGTGCGGCGAGGGTCTTTTCCGACACTTCGAAGTCGATCTTGCGCTCATCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGACC                                                                                                                                                       >  1:1802000/1‑150                                                               TCCGACACTTCGAAGTCGATCTTGCGCTCATCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGACCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCG                                                                                                                  <  1:381340/126‑1                                                               TCCGACACTTCGAAGTCGATCTTGCGCTCATCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGACCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCG                                                                                                                  >  2:381340/1‑126                                                                       TTCGAAGTCGATCTTGCGCTCATCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGA‑CCGGTACACCATCGCCTGGCCGGCGAGC                                                                                                                            >  1:2052487/1‑107                                                                       TTCGAAGTCGATCTTGCGCTCATCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGA‑CCGGTACACCATCGCCTGGCCGGCGAGC                                                                                                                            <  2:2052487/107‑1                                                                                             TCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGACCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGC                                                                                                                 <  2:1658409/97‑1                                                                                             TCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGACCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGC                                                                                                                 >  1:1658409/1‑97                                                                                                                                                   CGACCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGCAGCTTCCGCTTGGGCGACACCATCGAAGTCAAGGTCATGCGTGTTGATCTGGATGAGCGCAAGATCGACTTCGAAGTGTCGGAAAAGACCCTCGCCGCACCGATCGG      <  1:1187655/150‑1                                                                                                                                                   CGACCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGCAGCTTCCGCTTGGGCGACACCATCGAAGTCAAGGTCATGCGTGTTGATCT                                                               <  1:595181/93‑1                                                                                                                                                   CGACCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGCAGCTTCCGCTTGGGCGACACCATCGAAGTCAAGGTCATGCGTGTTGATCT                                                               >  2:595181/1‑93                                                                                                                                                     ACCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGCAGCTTCCGCTTGGGCGACACCATCGAAGTCAAGGTCATGCGTGTTGATCTGGATGAGCGCAAGATCGACTTCGAAGTGTCGGAAAAGACCCTTGCCGCACCGATCGGCC    >  2:130734/1‑150                                                                                                                                                     ACCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGCAGCTTCCGCTTGGGCGACACCATCGAAGTCAAGGTCATGCGTGTTGATCTGGATGAGCGCAAGATCGACTTCGAAGTGTCGGAAAAGACC                       <  1:1786940/131‑1                                                                                                                                                     ACCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGCAGCTTCCGCTTGGGCGACACCATCGAAGTCAAGGTCATGCGTGTTGATCTGGATGAGCGCAAGATCGACTTCGAAGTGTCGGAAAAGACC                       >  2:1786940/1‑131                                                                                                                                                      CCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGCAGCTTCCGCTTGGGCGACACCATCGAAGTCAAGGTCATGCGTGTTGATCTGGATGAGCGCAAGATCGCCATGGAAGTGTCGGAAAAGACCCTCGCCGCACCGATCGGCCG   >  1:23930/1‑150                                                                                                                                                       CCGGTACACCATCGCCTGGCCGGCGAGCGCGCCGGTCGCAGCTTCCGCTTGGGCGACACCATCGAAGTCAAGGTCATGCGTGTTGATCTGGATGAGCGCAAGATCGACTTCGAAGTGTCGGAAAAGACCCTCGCCGCACCGATCGGCCGC  >  1:317949/1‑150                                                                                                                                                                                                                                                                                                              CTTTTTCAGCAACCGGTGCGGCGCCACGCTGCTTGCGGCCGATCGGTGCGGCGAGGGTCTTTTCCGACACTTCGAAGTCGATCTTGCGCTCATCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5546800‑5546950 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGCAGCTTCCGCTTGGGCGACACCATCGAAGTCAAGGTCATGCGTGTTGATCTGGATGAGCGCAAGATCGACTTCGAAGTGTCGGAAAAGACCCTCGCCGCACCGATCGGCCGC  <  NC_002947/5546982‑5546834

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.