BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6050814 =	104 (1.110)	5 (0.060)	5/238	NT	5.2%	coding (1620/2109 nt)	spoT	bifunctional (p)ppGpp synthase/hydrolase
*	?	NC_002947	6050855 =	84 (0.950)	5 (0.060)	5/238	NT	5.2%	coding (1661/2109 nt)	spoT	bifunctional (p)ppGpp synthase/hydrolase

Only 100 of 116 total aligned reads displayed.

CTGAACAAGGTACTCACTGGCTTCGACAGCAGCCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAA  >  NC_002947/6050665‑6050963

actgatgttgcggcagttctccaggtgcacgaccatgcccttgccggccgacaggtggccgacaatcgggtcacccgggatcggcgtgcagcacttggcgtagctgagcaccaggccttcggtgccgcggatcgccagtgggccttctgg                                                                                                                                                            <  1:1287949‑M1/1‑1 (MQ=255)

 tgAACAAGGTACTCACTGGCTTCGACAGCAGCCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTcgcg‑‑‑‑‑c                                                                                                                                                      <  2:1576331/150‑1 (MQ=255)

  tgatgttgcggcagttctccaggtgcacgaccatgcccttgccggccgacaggtggccgacaatcgggtcacccgggatcggcgtgcagcacttggcgtagctgagcaccaggccttcggtgccgcggatcgccagtgggccttctgg‑‑‑‑‑cg                                                                                                                                                     <  1:1180481‑M1/3‑1 (MQ=255)

   aaCAAGGTACTCACTGGCTTCGACAGCAGCCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCgcg‑‑‑‑‑cgc                                                                                                                                                    <  2:1115651/150‑1 (MQ=255)

      aaGGTACTCACTGGCTTCGACAGCAGCCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑cgccgc                                                                                                                                                 <  2:1343608/150‑1 (MQ=255)

          tACTCACTGGCTTCGACAGCAGCCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCctgc                                                                                                                                             >  1:616639/1‑150 (MQ=255)

             tCACTGGCTTCGACAGCAGCCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGt                                                                                                                                          >  1:1477424/1‑150 (MQ=255)

              cACTGGCTTCGACAGCAGCCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTc                                                                                                                                         >  2:840173/1‑150 (MQ=255)

               aCTGGCTTCGACAGCAGCCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCg                                                                                                                                        >  2:904058/1‑150 (MQ=255)

               aCTGGCTTCGACAGCAGCCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCg                                                                                                                                        <  1:1961370/150‑1 (MQ=255)

               aCTGGCTTCGACAGCAGCCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCAGCatgaaaacg                                                                                                                                        >  2:732883/1‑144 (MQ=255)

                 tGGCTTCGACAGCAGCCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGc                                                                                                                                      >  1:1145542/1‑150 (MQ=255)

                     ttCGACAGCAGCCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGCAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGGCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGaa                                                                                                                                  >  2:1052590/1‑150 (MQ=255)

                      tCGACAGCAGCCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAg                                                                                                                                 <  1:657072/150‑1 (MQ=255)

                        gACAGCAGCCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGc                                                                                                                               <  1:79888/150‑1 (MQ=255)

                           agcagaATGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGaa                                                                                                                            <  1:638203/150‑1 (MQ=255)

                             cagcCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTc                                                                                                                                         <  2:1708643/135‑1 (MQ=255)

                             cagcCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTc                                                                                                                                         >  1:1708643/1‑135 (MQ=255)

                                ccTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCt                                                                                                                       <  1:1675491/150‑1 (MQ=255)

                                 cTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTg                                                                                                                      >  2:2021962/1‑150 (MQ=255)

                                  tGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGc                                                                                                                     >  2:363420/1‑150 (MQ=255)

                                   ggAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGcc                                                                                                                    >  1:310632/1‑150 (MQ=255)

                                      cttgccggccgacaggtggccgacaatcgggtcacccgggatcggcgtgcagcacttggcgtagctgagcaccaggccttcggtgccgcggatcgccagtgggcctacgtgGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTg                                                                                                                      <  1:1509562‑M1/39‑1 (MQ=255)

                                         aaTCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGaa                                                                                                                                  >  1:2205221/1‑130 (MQ=255)

                                         aaTCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGaa                                                                                                                                  <  2:2205221/130‑1 (MQ=255)

                                           tCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAg                                                                                                            >  1:2229104/1‑150 (MQ=255)

                                             ggccgacaggtggccgacaatcgggtcacccgggatcggcgtgcagcacttggcgtagctgagcaccaggccttcggtgccgcggatcgccagtgggccttctgG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGaa                                                                                                          >  2:208595‑M1/105‑150 (MQ=255)

                                             ccccAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGc                                                                                                                                      <  1:1714731/122‑1 (MQ=255)

                                             ccccAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGc                                                                                                                                      >  2:1714731/1‑122 (MQ=255)

                                             ccccAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGaa                                                                                                          >  2:482744/1‑150 (MQ=255)

                                             ccccAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGaa                                                                                                          >  2:2233704/1‑150 (MQ=255)

                                              cccAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAg                                                                                                         >  2:958881/1‑150 (MQ=255)

                                              cccAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAg                                                                                                         >  2:723929/1‑150 (MQ=255)

                                              cccAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAg                                                                                                         <  1:1664959/150‑1 (MQ=255)

                                               ccAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAgg                                                                                                        >  1:870377/1‑150 (MQ=255)

                                                cAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGc                                                                                                       <  1:1966817/150‑1 (MQ=255)

                                                       gCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTgg                                                                                                <  2:580238/150‑1 (MQ=255)

                                                       gCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑AGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTgg                                                                                                <  1:1189009/150‑1 (MQ=255)

                                                          tCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATGGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGa                                                                                             <  1:723929/150‑1 (MQ=255)

                                                           ccAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGAt                                                                                            >  2:2247689/1‑150 (MQ=255)

                                                            cAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATc                                                                                           >  1:1119581/1‑150 (MQ=255)

                                                             aGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATcc                                                                                          >  1:1128621/1‑150 (MQ=255)

                                                              gTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGTTGTCGGCCGAAGGCGaa                                                                                                                            >  2:1113715/1‑115 (MQ=255)

                                                              gTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGTTGTCGGCCGAAGGCGaa                                                                                                                            <  1:1113715/115‑1 (MQ=255)

                                                              gTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGcc                                                                                                                                     <  2:890713/106‑1 (MQ=255)

                                                              gTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGcc                                                                                                                                     >  1:890713/1‑106 (MQ=255)

                                                               tCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCcgc                                                                                        >  2:1060657/1‑150 (MQ=255)

                                                                 tATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCgg                                                                                      >  2:1706685/1‑150 (MQ=255)

                                                                  aTTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGc                                                                                     >  1:387168/1‑150 (MQ=255)

                                                                    tctcGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCAc                                                                                   <  2:2424432/150‑1 (MQ=255)

                                                                             gTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCt                                                                          <  1:924606/150‑1 (MQ=255)

                                                                              tACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTg                                                                         >  2:957430/1‑150 (MQ=255)

                                                                               aCCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTgg                                                                        <  1:2247689/150‑1 (MQ=255)

                                                                                tcggcgtgcagcacttggcgtagctgagcaccaggccttcggtgccgcggatcgccagtgggccttctgG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCgg                                                                                                                  <  1:1700667‑M1/38‑1 (MQ=255)

                                                                                tcggcgtgcagcacttggcgtagctgagcaccaggccttcggtgccgcggatcgccagtgggccttctgG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCgg                                                                                                                  >  2:1700667‑M1/70‑107 (MQ=255)

                                                                                    cTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTc                                                                   >  2:763004/1‑150 (MQ=255)

                                                                                     tGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCa                                                                  <  1:1063250/150‑1 (MQ=255)

                                                                                            cATAGAAGGCCTGCTCGAAGACATCGGCCTGGGCATCTGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGc                                                           <  2:1145542/150‑1 (MQ=255)

                                                                                            cATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCg                                                                                                                                        >  1:1851052/1‑73 (MQ=255)

                                                                                            cATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCg                                                                                                                                        <  2:1851052/73‑1 (MQ=255)

                                                                                             aTAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCAc                                                                                   >  2:711277/1‑125 (MQ=255)

                                                                                             aTAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCAc                                                                                   <  1:711277/125‑1 (MQ=255)

                                                                                             aTAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCt                                                                    >  1:2212865/1‑140 (MQ=255)

                                                                                             aTAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCt                                                                    <  2:2212865/140‑1 (MQ=255)

                                                                                             aTAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGcc                                                          >  1:385808/1‑150 (MQ=255)

                                                                                               agaagaCCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCct                                                                                                                                               >  1:1853498/1‑63 (MQ=255)

                                                                                               agaagaCCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCct                                                                                                                                               <  2:1853498/63‑1 (MQ=255)

                                                                                                gaagaCCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAg                                                       <  1:1328884/150‑1 (MQ=255)

                                                                                                 aagaCCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGt                                                      >  2:2272918/1‑150 (MQ=255)

                                                                                                      cTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGtgctgc                                                 >  1:7352/1‑150 (MQ=255)

                                                                                                            gAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGa                                                                                             <  2:137157/100‑1 (MQ=255)

                                                                                                            gAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGa                                                                                             >  1:137157/1‑100 (MQ=255)

                                                                                                            gAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCg                                           >  1:507750/1‑150 (MQ=255)

                                                                                                               gACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTgg                                                                        >  1:2438938/1‑118 (MQ=255)

                                                                                                               gACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTgg                                                                        <  2:2438938/118‑1 (MQ=255)

                                                                                                                   tCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCgg                                    <  2:2165154/150‑1 (MQ=255)

                                                                                                                   tCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCgg                                    >  2:645893/1‑150 (MQ=255)

                                                                                                                   tCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCgg                                    <  1:769581/150‑1 (MQ=255)

                                                                                                                      gCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTg                                 >  2:986771/1‑150 (MQ=255)

                                                                                                                         tGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGAcc                              <  2:387168/150‑1 (MQ=255)

                                                                                                                          gtgCAACCGCATGGACTCCGTGGTCGCG‑‑‑‑‑CGGTGGCCGCTGGCGGCCGAACGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGAccc                             <  2:1841354/148‑1 (MQ=255)

                                                                                                                            gCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGGTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCGAGTGCTGCACGCCGATCCCGGGTGACCCGa                           >  2:1277976/1‑150 (MQ=255)

                                                                                                                             cAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGAt                          <  1:363420/150‑1 (MQ=255)

                                                                                                                             cAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGAt                          <  2:1119581/150‑1 (MQ=255)

                                                                                                                              aaCCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGAtt                         >  2:2266115/1‑150 (MQ=255)

                                                                                                                              aaCCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGAtt                         <  1:991807/150‑1 (MQ=255)

                                                                                                                                ccGNATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGt                       >  2:1498558/1‑150 (MQ=255)

                                                                                                                                ccGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGt                       <  1:986771/150‑1 (MQ=255)

                                                                                                                                ccGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGt                       >  1:2328368/1‑150 (MQ=255)

                                                                                                                                 cGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAg                                                                                                         >  2:2005378/1‑67 (MQ=255)

                                                                                                                                 cGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAg                                                                                                         <  1:2005378/67‑1 (MQ=255)

                                                                                                                                 cGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTc                      <  2:1552571/150‑1 (MQ=255)

                                                                                                                                         cTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCa                                                                                                             <  2:1365584/55‑1 (MQ=255)

                                                                                                                                         cTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCa                                                                                                             >  1:1365584/1‑55 (MQ=255)

                                                                                                                                           aCGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGt            <  1:2233704/150‑1 (MQ=255)

                                                                                                                                           aCGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGt            <  1:1793046/150‑1 (MQ=255)

                                                                                                                                               ggTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTcggc        <  1:2266115/150‑1 (MQ=255)

                                                                                                                                                 tCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTcggccg      <  2:2328368/150‑1 (MQ=255)

                                                                                                                                                  cgcg‑‑‑‑‑cgCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTcggccgg     >  1:1824098/1‑150 (MQ=255)

                                                                                                                                                     G‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCaa  <  1:335166‑M1/150‑1 (MQ=255)

CTGAACAAGGTACTCACTGGCTTCGACAGCAGCCTGGAGAAAATCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCAGAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAA  >  NC_002947/6050665‑6050963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.