New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 94121	42 (0.970)	3 (0.070)	3/240	NT	6.5%	coding (418/897 nt)	trpI	HTH‑type transcriptional regulator TrpI
	?	NC_002947	= 94200	46 (1.120)					coding (497/897 nt)	trpI	HTH‑type transcriptional regulator TrpI

ATGTGAGCGAGGCGCCATTCGTGCTGGGCTGCTCGGGCAGCCTGCTGGCGCGGTGGTTTATTCCGCGGCTGGGGCGGTTGCAGGCGGATTTGCCTGAGCTGCGCTTGCACCTGTCGGCGGGTGAGGGCGACCTTGACCCGCGGCGGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/93972‑94121 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcccgATGCATTCCTCGGCCAGCACATGCACCTGCATGTCCGCTGGCCACGGTGGCTCGGCATACACCAGCAACGCATCCAGCCCGGGCCGCCGCGGGTCAAGGTCGCCCTCACCCGCCGACAGGTGCAAGCGCAGCTCAGGCAAATCCG  <  NC_002947/94200‑94056                                                                                                                                                                                                                                                                                                         ATGTGAGCGAGGCGCCATTCGTGCTGGGCTGCTCGGGCAGCCTGCTGGCGCGGTGGTTTATTCCGCGGCTGGGGCGGTTGCAGGCGGATTTGCCTGAGCTGCGCTTGCACCTGTCGGCGGGTGAGGGCGACCTTGACCCGCGGCGGCCCG                                                                                                                                                   <  2:17250/150‑1                                                                 GCGGCTGGGGCGGTTGCAGGCGGATTTGCCTGAGCTGCGCTTGCACCTGTCGGCGGGTGAGGGCGACCTTGACCCGCGGCGGCCCGATGCATTCCTCGGCCAGCACATGCACCTGCATGTCCGCTGGCCACGGTGGCTCGGCATACACCA                                                                                   >  1:472235/1‑150                                                                                          TTGCCTGAGCTGCGCTTGCACCTGTCGGCGGGTGAGGGCGACCTTGACCCGCGGCGGCCCGATGCATTCCTCGGCCAGCACATGCACCTGCATGTCCGCTGGCCACGGTGGCTCGGCATACACCAGCAACGCATCCAGCCCGGGCCGCCG                                                          <  2:955136/150‑1                                                                                              CTGAGCTGCGCTTGCACCTGTCGGCGGGTGAGGGCGACCTTGACCCGCGGCGGCCCGATGCATTCCTCGGCCAGCACATGCACCTGCATGTCCGCTGGCCACGGTGGCTCGGCATACACCAGCAACGCATCCAGCCCGGGCCGCCGCGGG                                                      <  2:472235/150‑1                                                                                                                                                  GCCCGATGCATTCCTCGGCCAGCACATGCACCTGCATGTCCGCTGGCCACGGTGGCTCGGCATACACCAGCAACGCATCCAGCCCGGGCCGCCGCGGGTCAAGGTCGCCCTCACCCGCCGACAGGTGCAAGCGCAGCTCAGGCAAATCCG  >  1:50560/1‑150                                                                                                                                                                                                                                                                                                         ATGTGAGCGAGGCGCCATTCGTGCTGGGCTGCTCGGGCAGCCTGCTGGCGCGGTGGTTTATTCCGCGGCTGGGGCGGTTGCAGGCGGATTTGCCTGAGCTGCGCTTGCACCTGTCGGCGGGTGAGGGCGACCTTGACCCGCGGCGGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/93972‑94121 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcccgATGCATTCCTCGGCCAGCACATGCACCTGCATGTCCGCTGGCCACGGTGGCTCGGCATACACCAGCAACGCATCCAGCCCGGGCCGCCGCGGGTCAAGGTCGCCCTCACCCGCCGACAGGTGCAAGCGCAGCTCAGGCAAATCCG  <  NC_002947/94200‑94056

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.