New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 497685	55 (1.270)	4 (0.100)	4/244	NT	7.9%	coding (1554/2388 nt)	PP_0409	two‑component system sensor histidine kinase
	?	NC_002947	= 497738	41 (0.990)					coding (1607/2388 nt)	PP_0409	two‑component system sensor histidine kinase

CGTGACCCGGCCGAGGGCGATCTGGAGTTCCCCTATATCAGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/497536‑497685 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtg‑AGGA‑TGCGCCCCTGCCAGGACCAGTCCTGGTCGCTGGCCAGGGCCAGGTCCTGCACCCTGTGATAATCAGCACGGTCCTCGGGGTGCACCAGGTTGCGCAGGCCCATCTGCGGGTGCTGGATCTCGCTGGGTGCATAACCCACCAAAGC  <  NC_002947/497738‑497590                                                                                                                                                                                                                                                                                                               CGTGACCCGGCCGAGGGCGATCTGGAGTTCCCCTATATCAGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTG                                                                                                                                                         <  2:199378/150‑1                                                  GCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCCCAGGGTGCAGGACCTTGCCCCTGCCAGCACCAGTCCTGGTCGCTGGCCAGGGCCAG                                                                                                        <  1:445630/150‑1                                                                GGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTG‑AGGA‑TGCGCCCCTGCCAGGACCAGTCCTGGTCGCTGGCCAGGGCCAGGTCCTGCACCCTGTGA                                                                                        <  1:923502/150‑1                                                                               GAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTG‑AGGA‑TGCGCCCCTGCCAGGACCAGTCCTGGTCGCTGGCCAGGGCCA                                                                                                         >  1:781530/1‑118                                                                               GAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTG‑AGGA‑TGCGCCCCTGCCAGGACCAGTCCTGGTCGCTGGCCAGGGCCA                                                                                                         <  2:781530/118‑1                                                                                                                                                      G‑AGGA‑TGCGCCCCTGCCAGGACCAGTCCTGGTCGCTGGCCAGGGCCAGGTCCTGCACCCTGTGATAATCAGCACGGTCCTCGGGGTGCACCAGGTTGCGCAGGCCCATCTGCGGGTGCTGGATCTCGCTGGGTGCATAACCCACCANAGC  <  2:697205/150‑1                                                                                                                                                                                                                                                                                                               CGTGACCCGGCCGAGGGCGATCTGGAGTTCCCCTATATCAGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/497536‑497685 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtg‑AGGA‑TGCGCCCCTGCCAGGACCAGTCCTGGTCGCTGGCCAGGGCCAGGTCCTGCACCCTGTGATAATCAGCACGGTCCTCGGGGTGCACCAGGTTGCGCAGGCCCATCTGCGGGTGCTGGATCTCGCTGGGTGCATAACCCACCAAAGC  <  NC_002947/497738‑497590

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.