New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 709189 = | 38 (0.880) | 5 (0.120) | 5/238 | NT | 12.1% | intergenic (+49/‑70) | murJ/ribF | lipid II flippase/bifunctional riboflavin kinase/FMN adenylyltransferase |
? | NC_002947 | 709216 = | 37 (0.910) | intergenic (+76/‑43) | murJ/ribF | lipid II flippase/bifunctional riboflavin kinase/FMN adenylyltransferase |
GAACCCCGTCGAAGTTGCCAATGGTGGCGACACAGCCCCGGTGCTCGGGGCGCAGGTTGTGAAGACCTCGAACCAGCTGCATAACGCGCTTCTTGCTCATAAAGTGGCCGATTATAACCACACCCGGGCGCTGGTGACAGGCAGCAGCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/709340‑709189 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcccGGGTGTGGTTATAATCGGCCACTTTATGAGCAAGAAGCGCGTTATGCAGCTGGTTCGAGGTCTTCACAACCTGCGCCCCGAGCACCGGGGCTGTGTCGCCACCATTGGCAACTTCGACGGGGTTCACCGCGGCCACCAGGCAATCCTG > NC_002947/709216‑709363 cacCCCCGTCGAAGTTGCCAATGGTGGCGACACAGCCCCGGTGCTCGGGGCGCAGGTTGTGAAGACCTCGAACCAGCTGCATAACGCGCTTCTTGCTCATAAAGTGGCCGATTATAACCACACCCGGGCGCTGGTGACAGGCAGCAGCGC < 1:1084579/147‑1 GAACCCCGTCGAAGTTGCCAATGGTGGCGACACAGCCCCGGTGCTCGGGGCGCAGGTTGTGAAGACCTCGAACCAGCTGCATAACGCGCTTCTTGCTCATAAAGTGGCCGATTATAACCACACCCGGGCGCTGGTGACAGGCAGCAGCGC < 1:34817/150‑1 AATGGTGGCGACACAGCCCCGGTGCTCGGGGCGCAGGTTGTGAAGACCTCGAACCAGCTGCATAACGCGCTTCTTGCTCATAAAGTGGCCGATTATAACCACACCCGGGCGCTGGTGACAGGCAGCAGCGCCC > 1:589084/1‑133 AATGGTGGCGACACAGCCCCGGTGCTCGGGGCGCAGGTTGTGAAGACCTCGAACCAGCTGCATAACGCGCTTCTTGCTCATAAAGTGGCCGATTATAACCACACCCGGGCGCTGGTGACAGGCAGCAGCGCCC < 2:589084/133‑1 GCGACACAGCCCCGGTGCTCGGGGCGCAGGTTGTGAAGACCTCGAACCAGCTGCATAACGCGCTTCTTGCTCATAAAGTGGCCGATTATAACCACACCCGGGCGCTGCTGCCTGTCACCAGCGCCCGGGTGTGGT > 1:87377/1‑135 GCGACACAGCCCCGGTGCTCGGGGCGCAGGTTGTGAAGACCTCGAACCAGCTGCATAACGCGCTTCTTGCTCATAAAGTGGCCGATTATAACCACACCCGGGCGCTGCTGCCTGTCACCAGCGCCCGGGTGTGGT < 2:87377/135‑1 TCGAACCAGCTGCATAACGCGCTTCTTGCTCATAAAGTGGCCGATTATAACCACACCCGGGCGCTGCTGCCTGTCACCAGCGCCCGGGTGTGGTTATAATC < 1:145953/101‑1 TCGAACCAGCTGCATAACGCGCTTCTTGCTCATAAAGTGGCCGATTATAACCACACCCGGGCGCTGCTGCCTGTCACCAGCGCCCGGGTGTGGTTATAATC > 2:145953/1‑101 AGGCAGCAGCGCCCAGGTGTGGTTATAATCGGCCACTTTATGAGCAAGAAGCGCGTTATGCAGCTGGTTCGAGGTCTTCACAACCTGCGCCCCGAGCACCGGGGCTGTGTCGCCACCATTGGCAACTTCGACGGGTTTCACCGCGGCCAC > 2:256672/1‑150 AGCGCCCGGGTGTGGTTATAATCGGCCACTTTATGAGCAAGAAGCGCGTTATGCAGCTGGTTCGAGGTCTTCACAACCTGCGCCCCGAGCACCGGGGCTGTGTCGCCACCATTGGCAACTTCGACGGGGTTCACCGCGGCCACCAGGCAA < 2:373072/150‑1 AGCGCCCGGGTGTGGTTATAATCGGCCACTTTATGAGCAAGAAGCGCGTTATGCAGCTGGTTCGAGGTCTTCACAACCTGCGCCCCGAGCACCGGGG > 1:258928/1‑97 AGCGCCCGGGTGTGGTTATAATCGGCCACTTTATGAGCAAGAAGCGCGTTATGCAGCTGGTTCGAGGTCTTCACAACCTGCGCCCCGAGCACCGGGG < 2:258928/97‑1 CCGGGTGTGGTTATAATCGGCCACTTTATGAGCAAGAAGCGCGTTATGCAGCTGGTTCGAGGTCTTCACAACCTGCGCCCCGAGCACCGGGGCTGTGTCGCCACCATTGGCAACTTCGACGGGGTTCACCGCGGCCACCAGGCCATCCTG > 1:148221/1‑150 GAACCCCGTCGAAGTTGCCAATGGTGGCGACACAGCCCCGGTGCTCGGGGCGCAGGTTGTGAAGACCTCGAACCAGCTGCATAACGCGCTTCTTGCTCATAAAGTGGCCGATTATAACCACACCCGGGCGCTGGTGACAGGCAGCAGCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/709340‑709189 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcccGGGTGTGGTTATAATCGGCCACTTTATGAGCAAGAAGCGCGTTATGCAGCTGGTTCGAGGTCTTCACAACCTGCGCCCCGAGCACCGGGGCTGTGTCGCCACCATTGGCAACTTCGACGGGGTTCACCGCGGCCACCAGGCAATCCTG > NC_002947/709216‑709363 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |