New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1231348 | 52 (1.200) | 3 (0.070) | 3/252 | NT | 5.9% | coding (1371/1545 nt) | glpD | aerobic glycerol‑3‑phosphate dehydrogenase |
? | NC_002947 | = 1231385 | 44 (1.020) | coding (1334/1545 nt) | glpD | aerobic glycerol‑3‑phosphate dehydrogenase |
GCGACAGGCCCAGCTTGGTGCGACGCCAGATAATGTCAGCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1231254‑1231348 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cACGGCCCCGAAGACCTCGGGCAGGCTATCGGGGCCGGGCTGTTCACCCGCGAGGT < NC_002947/1231385‑1231331 GCGACAGGCCCAGCTTGGTGCGACGCCAGATAATGTCAGCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCACGGCCCCGAAGACCTCGGGCAGGCTATCGGGGCCGGGCTGTTCACCCGCGAGGT < 1:840030/150‑1 CCACCTCGCGGGTGAACAGCACGGCCCCGAAGACCTCGGGCAGGCTATCGGG > 1:6846/1‑52 CCACCTCGCGGGTGAACAGCACGGCCCCGAAGACCTCGGGCAGGCTATCGGG < 2:6846/52‑1 GCGACAGGCCCAGCTTGGTGCGACGCCAGATAATGTCAGCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1231254‑1231348 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cACGGCCCCGAAGACCTCGGGCAGGCTATCGGGGCCGGGCTGTTCACCCGCGAGGT < NC_002947/1231385‑1231331 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |