New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1231348	52 (1.200)	3 (0.070)	3/252	NT	5.9%	coding (1371/1545 nt)	glpD	aerobic glycerol‑3‑phosphate dehydrogenase
	?	NC_002947	= 1231385	44 (1.020)					coding (1334/1545 nt)	glpD	aerobic glycerol‑3‑phosphate dehydrogenase

TGCTCCTGCGCGGTCAGCGACAGGCCCAGCTTGGTGCGACGCCAGATAATGTCAGCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTCGACAGGCAACCAGCCGCAACGTGCCAGTACGGCATCGATCAGCGCCTGTACCGTTGTCATGCCCTCTGCGCCCGGTAGTGGCGCA  >  NC_002947/1231238‑1231534                                                                                                                                                    |                                                                                                                                                      tGCTCCTGCGCGGTCAGCGACAGGCCCAGCTTGGTGCGACGCCAGATAATGTCAGCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGa                                                                                                                                                     >  1:211718/1‑150 (MQ=255)   cTCCTGCGCGGTCAGCGACAGGCCCAGCTTGGTGCGACGCCAGATAATGTCAGCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAAc                                                                                                                                                   <  1:381015/150‑1 (MQ=255)   cTCCTGCGCGGTCAGCGACAGGCCCAGCTTGGTGCGACGCCAGATAATGTCAGCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAAc                                                                                                                                                   <  1:1076701/150‑1 (MQ=255)         cgcgGTCAGCGACAGGCCCAGCTTGGTGCGACGCCAGATAATGTCAGCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATc                                                                                                                                             <  2:211718/150‑1 (MQ=255)           cgGTCAGCGACAGGCCCAGCTTGGTGCGACGCCAGATAATGTCAGCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGa                                                                                                                                           <  1:813477/150‑1 (MQ=255)            ggTCAGCGACAGGCCCAGCTTGGTGCGACGCCAGATAATGTCAGCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCATGAACTCCATCGag                                                                                                                                          <  1:1019221/150‑1 (MQ=255)              tCAGCGACAGGCCCAGCTTGGTGCGACGCCAGATAATGTCAGCGGTTTGCTCTTCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGagca                                                                                                                                        >  1:308194/1‑150 (MQ=255)                aGCGACAGGCCCAGCTTGGTGCGACGCCAGATAATGTCAGCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGagcagc                                                                                                                                      >  1:873568/1‑150 (MQ=255)                    aCAGGCCCAGCTTGGTGCGACGCCAGATAATGTCAGCGGTGTGCTCTGGCCATGACTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGACCCGATAGCCTGCCCGCGGGCTTCGGGGCCGTGAACACGAACGAGCAgccgcc                                                                                                                                  >  2:529705/1‑150 (MQ=255)                        gCCCAGCTTGGTGCGACGCCAGATAATGTCAGCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCacac                                                                                                                              >  1:44089/1‑150 (MQ=255)                            aGCTTGGTGCGACGCCAGATAATGTCAGCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCgg                                                                                                                          <  1:48536/150‑1 (MQ=255)                             gCTTGGTGCGACGCCAGATAATGTCAGCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGc                                                                                                                         >  1:83070/1‑150 (MQ=255)                                 ggTGCGACGCCAGATAATGTCAGCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGcc                                                                                                                     <  2:424165/150‑1 (MQ=255)                                    gCGACGCCAGATAATGTCAGCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTa                                                                                                                  >  1:483047/1‑150 (MQ=255)                                         gCCAGATAATGTCAGCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGa                                                                                                             >  2:78981/1‑150 (MQ=255)                                          ccAGATAATGTCAGCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCACCCGCCACACGCGGCTGCAGTAAGTGAg                                                                                                            >  2:145988/1‑150 (MQ=255)                                                      aGCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGttt                                                                                                <  2:873568/150‑1 (MQ=255)                                                       gCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTg                                                                                               <  1:946015/150‑1 (MQ=255)                                                            ttGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAg                                                                                          <  1:886277/150‑1 (MQ=255)                                                                tctGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTCg                                                                                      >  2:286674/1‑150 (MQ=255)                                                                   gCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTCGACa                                                                                   >  2:466211/1‑150 (MQ=255)                                                                   gCCCATTCCCCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGTCCAGGTCGACa                                                                                   <  2:831836/150‑1 (MQ=255)                                                                    cccATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTCGACAg                                                                                  >  2:447295/1‑150 (MQ=255)                                                                    cccATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGAGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTGGACAg                                                                                  >  1:325383/1‑150 (MQ=255)                                                                       aTTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGGAACACGCTGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTCGACAGGCa                                                                               >  2:309381/1‑150 (MQ=255)                                                                              ctccAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTCGACAGGCAACCAGcc                                                                        >  1:658060/1‑150 (MQ=255)                                                                              ctccAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTCGACAGGCAACCAGcc                                                                        <  1:286674/150‑1 (MQ=255)                                                                              ctccAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTCGACAGGCAACCAGcc                                                                        <  1:1099042/150‑1 (MQ=255)                                                                               tccAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTCGACAGGCAACCAGCCg                                                                       >  1:654830/1‑150 (MQ=255)                                                                                 cagcagGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCa                                                                                           <  2:1040004/128‑1 (MQ=255)                                                                                 cagcagGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGACCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCa                                                                                           >  1:1040004/1‑128 (MQ=255)                                                                                   gcagGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTCGACAGGCAACCAGCCGCAAc                                                                   >  2:706781/1‑150 (MQ=255)                                                                                    cagGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGa                                                                                                                                           >  1:227334/1‑77 (MQ=255)                                                                                    cagGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGa                                                                                                                                           <  2:227334/77‑1 (MQ=255)                                                                                     agGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTCGACAGGCAACCAGCCGCAACGt                                                                 <  1:447295/150‑1 (MQ=255)                                                                                              aCCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTgctgttcacccgcgaggtggattacctgctggaggaggaatgggcagagcaaaccgctgacattatctggcgtcgcaccaagctgggcctgtcgc                                                        <  1:840030‑M2/150‑96 (MQ=255)                                                                                                 tCGCGGGTGAACAGCCCGGCCCCGATAGCCTACCCGAGGTCTTAGGGGCCGTGAACGCCATCGAGCAGAAGACACACGCGGCTGCAGTAAGTGAGAACCCAGCGTTTGGAAAGGTCGAAAGGCAACCAGCCGAAACGTGACAGTACggga                                                     >  2:1077046/1‑148 (MQ=255)                                                                                                         gAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAAAGATAAACAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTCGACAGGCAACCAGCCGCAACGTGCCAGTACGGCATCGATCAg                                             >  1:630468/1‑150 (MQ=255)                                                                                                            cAGCCCGGACCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGAAAGGTCGACAGGCAACCAGCCGCAACGTGCCAGTACGGCATCGATCAgcgc                                          <  2:432160/150‑1 (MQ=255)                                                                                                              gCCCGGCCCTGGCCGCGTGTCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTCGACAGGCAACCAGCCGCAACGTGCCAGTACGGCATCAATCAGCGCCt                                        <  2:308194/150‑1 (MQ=255)                                                                                                              gCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTCGACAGGCAACCAGCCGCAACGTGCCAGTACGGCATCGATCAGCGCCt                                        <  1:797897/150‑1 (MQ=255)                                                                                                              gCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTCGACAGGCAACCAGCCGCAACGTGCCAGTACGGCATCGATCAGCGCCt                                        >  2:925450/1‑150 (MQ=255)                                                                                                                     cccGATAGCCTGCCCGAGGTCTTCGGGGCCGTgctgttcacccgcgaggtgg                                                                                                                                   >  1:6846‑M2/1‑32 (MQ=255)                                                                                                                     cccGATAGCCTGCCCGAGGTCTTCGGGGCCGTgctgttcacccgcgaggtgg                                                                                                                                   <  2:6846‑M2/52‑21 (MQ=255)                                                                                                                       cGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCa                                                                                                          <  2:3938/75‑1 (MQ=255)                                                                                                                       cGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCa                                                                                                          >  1:3938/1‑75 (MQ=255)                                                                                                                                 cccGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTCGACAGGCAACCAGCCGCAACGTGCCAGTACGGCATCGATCAGCGCCTGTACCGTTGTCATGCCctc                     <  2:44089/150‑1 (MQ=255)                                                                                                                                       gTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTCGACAGGCAACCAGCCGCAACGTGCCAGTACGGCATCGATCAGCGCCTGTACCg                                  <  2:1065959/131‑1 (MQ=255)                                                                                                                                       gTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTCGACAGGCAACCAGCCGCAACGTGCCAGTACGGCATCGATCAGCGCCTGTACCg                                  >  1:1065959/1‑131 (MQ=255)                                                                                                                                               ggCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCTAAAATAATAGGCAACCAGCCGCAACGTGCCAGTACGGCATCGATCAGCGCCTGTACCGTTGTCATGCCCTCTGCGCCCGGTAGTg       <  1:466211/150‑1 (MQ=255)                                                                                                                                                    tGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTCGACAGGCAACCAGCCGCAACGTGCCAGTACGGCATCGATCAGCGCCTGTACCGTTGTCATGCCCTCTGCGCCCGGTAGTGGCGCa  >  1:706295/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                      TGCTCCTGCGCGGTCAGCGACAGGCCCAGCTTGGTGCGACGCCAGATAATGTCAGCGGTTTGCTCTGCCCATTCCTCCTCCAGCAGGTAATCCACCTCGCGGGTGAACAGCCCGGCCCCGATAGCCTGCCCGAGGTCTTCGGGGCCGTGAACGCCATCGAGCAGCCGCCACACGCGGCTGCCGTAAGTGAGCACCCAGCGTTTGGCCAGGTCGACAGGCAACCAGCCGCAACGTGCCAGTACGGCATCGATCAGCGCCTGTACCGTTGTCATGCCCTCTGCGCCCGGTAGTGGCGCA  >  NC_002947/1231238‑1231534

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.