New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2248271	35 (0.810)	3 (0.070)	3/244	NT	7.2%	coding (1371/3297 nt)	PP_1983	PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
	?	NC_002947	= 2248318	44 (1.060)					coding (1324/3297 nt)	PP_1983	PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase

GTGATCAGGCGGCTGGAAATCACACAGGTCAGCGGGTCGCCATTGCGGTGGTTGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2248119‑2248271 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgTTCACCCAGACCTTCGGCTGGAGCAGCGCGCAGGTGCTTGGGCGTACCGCCGAGGAAATCGGCCTGTGGGCCGAGTCCGTCGAGCGCGCGAAACGTATCGAGCAGGTGATCCGCGAACAGGCCTTGAGTAACGTCGCCGTGGTACTCAA  <  NC_002947/2248318‑2248170                                                                                                                                                                                                                                                                                                                GTGATCAGGCGGCTGGAAATCACACAGGTCAGCGGGTCGCCATTGCGGTGGTTGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCG                                                                                                                                                          >  2:494096/1‑150                                       GCCATTGCGGTGGTTGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGTTCACCCAGACCTTCGGCTGGAGCAGCGCGCAGGT                                                                                                                    >  2:896049/1‑150                                                      GAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGTTCACCCAGACCTTCGGCTGGAGCAGCGCTCAGCTGCTTTGGCTTACCGC                                                                                                     <  2:831105/150‑1                                                         TACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGTTCACCCAGACCTTCGGCTGGAGCAGCGCGCAGGTGCTTGGGCGTACCGCCGA                                                                                                  <  1:896049/150‑1                                                                                                                                                         GTTCACCCAGACCTTCGGCTGGAGCAGCGCGCAGGTGCTTGGGCGTACCGCCGAGGAAATCGGCCTGTGGGCCGCGTCCGTCGAGCGCGCGAAACGTATCGAGCAGGTGATCCGCGAACAGGCCTTGAGTAACGTCGCCGTGGTACTCAA  >  2:934019/1‑150                                                                                                                                                         GTTCACCCAGACCTTCGGCTGGAGCAGCGCGCAGGTGCTTGGGCGTACCGCCGAGGAAATCGGCCTGTGGGCCGAGTCCGTCGAGCGCGCGAAACGTATCGAGCAGGTGATCCGCGAACAGGCCTTGAGTAACGTCGCCGTGGTACTCAA  >  1:791428/1‑150                                                                                                                                                                                                                                                                                                                GTGATCAGGCGGCTGGAAATCACACAGGTCAGCGGGTCGCCATTGCGGTGGTTGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2248119‑2248271 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgTTCACCCAGACCTTCGGCTGGAGCAGCGCGCAGGTGCTTGGGCGTACCGCCGAGGAAATCGGCCTGTGGGCCGAGTCCGTCGAGCGCGCGAAACGTATCGAGCAGGTGATCCGCGAACAGGCCTTGAGTAACGTCGCCGTGGTACTCAA  <  NC_002947/2248318‑2248170

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.