New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2248271 | 35 (0.810) | 3 (0.070) | 3/244 | NT | 7.2% | coding (1371/3297 nt) | PP_1983 | PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase |
? | NC_002947 | = 2248318 | 44 (1.060) | coding (1324/3297 nt) | PP_1983 | PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase |
GCGGCTGGAAATCACACAGGTCAGCGGGTCGCCATTGCGGTGGTTGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAGTGTCCTGGCGTGTGACGCAGATCGGGTCGGGGCTGACCTGGAACAGGCTGGCAAACTTCTCTTCCGAGGCGCT > NC_002947/2248127‑2248420 | gcggcTGGAAATCACACAGGTCAGCGGGTCGCCATTGCGGTGGTTGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACg > 1:797413/1‑150 (MQ=255) acacaGGTCAGCGGGTCGCCATTGCGGTGGTTGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTgc > 1:934019/1‑150 (MQ=255) acaGGTCAGCGGGTCGCCATTGCGGTGGTTGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTgcgc > 2:832855/1‑150 (MQ=255) gggTCGCCATTGCGGTGGTTGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAg < 1:241780/150‑1 (MQ=255) ggTCGCCATTGCGGTGGTTGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGc > 1:396865/1‑150 (MQ=255) gCCATTGCGGTGGTTGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGttcacccagaccttcggctggagcagcgcgcaggt > 2:896049‑M1/1‑115 (MQ=255) cGGTGGTTGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGCCTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAACACGTGCGCTCTGCTCCAGCCGAAGGTCTgg < 2:852391/150‑1 (MQ=255) cGGTGGTTGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTgg < 1:555791/150‑1 (MQ=255) gtggtTGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGt > 2:809281/1‑150 (MQ=255) ttGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAAc > 1:791428‑M2/1‑149 (MQ=255) ttGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACGCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAAc > 2:934019‑M2/1‑149 (MQ=255) gAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGttcacccagaccttcggctggagcagcgctcagctgctttggcttaccgc < 2:831105‑M1/150‑51 (MQ=255) tACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGttcacccagaccttcggctggagcagcgcgcaggtgcttgggcgtaccgccga < 1:896049‑M1/150‑54 (MQ=255) cGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGa < 1:832855/150‑1 (MQ=255) ttACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATg > 1:610467/1‑150 (MQ=255) cAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTg < 2:797413/150‑1 (MQ=255) gCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCa < 1:409755/150‑1 (MQ=255) gCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGCCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCa > 2:23768/1‑150 (MQ=255) tGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCCGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGGTGAACTGGCCAgtg > 1:331265/1‑150 (MQ=255) tGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGCCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAgtg < 1:23768/150‑1 (MQ=255) gcgGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAGTGTCCTg > 2:817423/1‑150 (MQ=255) aTCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAGTGTCCTGGCgt < 1:809281/150‑1 (MQ=255) aTCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAGTGTCCTGGCgt < 1:469370/150‑1 (MQ=255) gCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAGTGTCCTGGCGTGTGACGc > 1:471751/1‑150 (MQ=255) gATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAGTGTCCTGGCGTGTGACGCAGAt < 1:110107/150‑1 (MQ=255) agaCGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGc > 2:295448/3‑124 (MQ=255) aTACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGc < 1:295448/124‑1 (MQ=255) aTACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAGTGTCCTGGCGTGTGACGCAGAtc < 1:1033854/150‑1 (MQ=255) tCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAGTGTCCTGGCGCGTGACGCAGAtcgggtcgg < 2:610467/150‑1 (MQ=255) cTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAGTGTCCTGGCGTGTGACGCAGATCGGGTCGGGGCTGAc < 2:991100/150‑1 (MQ=255) ggtgggACTCCGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAGTGTCCTGGCGTGTGACGCAGATCGGGTCGGGGCTGACCt < 2:396865/146‑1 (MQ=255) gACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAGTGTCCTGGCGTGTGACGCAGATCGGGTCGGGGCTGACCTg < 1:95163/150‑1 (MQ=255) tCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAGTGTCCTGGCGTGTGACGCAGAtcg < 2:1042518/127‑1 (MQ=255) tCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAGTGTCCTGGCGTGTGACGCAGAtcg > 1:1042518/1‑127 (MQ=255) tCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAGTGTCCTGGCGTGTGACGCAGATCGGGTCGGGGCTGACCTGGAACAgg > 1:438507/1‑150 (MQ=255) gCCCACGGGCCGATTTCCTCGTCGGTACCTCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGTCCAGTGTCCTGGCGTGTGTCGCAGATCGGGTCGGGGCTTACCTGGAACAGGCTg < 2:373042/150‑1 (MQ=255) cccACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAGTGTCCTGGCGTGTGACGCAGATCGGGTCGGGGCTGACCTGGAACAGGCTgg > 1:1036286/1‑150 (MQ=255) cccACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAGTGTCCTGGCGTGTGACGCAGATCGGGTCGGGGCTGACCTGGAACAGGCTgg > 2:761919/1‑150 (MQ=255) gCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAGTGTCCTGGCGTGTGACGCAGATCGGGTCGGGGCTGACCTGGAACAGGCTGGCAAACtt < 1:1031232/150‑1 (MQ=255) ccTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAGTGTCCTGGCGTGTGACGCAGATCGGGTCGGGGCTGACCTGGAACAGGCTGGCAAACTTCTCTTCCg < 1:817423/150‑1 (MQ=255) tCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAAcgccgaggaaatcggcctgtgggccgagtccgtcgagcgcgcgaaacgtatcgagcaggtgatccgcgaacaggccttgagtaacgtcgccgtggta < 1:896049‑M2/150‑98 (MQ=255) tCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAGTGTCCTGGCGTGTGACGCAGATCGGGTCGGGGCTGACCTGGAACAGGCTGGCAAACTTCTCTTCCGAg > 2:924333/1‑150 (MQ=255) gcggTAAGCCAAAGCAGCTGAGCGCTGCTCCAGCCGAAGGTCTGGGTGAAcgccgaggaaatcggcctgtgggccgagtccgtcgagcgcgcgaaacgtatcgagcaggtgatccgcgaacaggccttgagtaacgtcgccgtggtactc < 2:831105‑M2/150‑101 (MQ=255) gttcacccagaccttcggctggagcagcgcgcaggtgcttgggcgtaccgccgaggaaatcggcctgtgggccgcgtccgtcgagcgcgcgaaacgtatcgagcaggtgatccgcgaacaggccttgagtaacgtcgccgtggtactcaa > 2:934019‑M1/1‑1 (MQ=255) gttcacccagaccttcggctggagcagcgcgcaggtgcttgggcgtaccgccgaggaaatcggcctgtgggccgagtccgtcgagcgcgcgaaacgtatcgagcaggtgatccgcgaacaggccttgagtaacgtcgccgtggtactcaa > 1:791428‑M1/1‑1 (MQ=255) | GCGGCTGGAAATCACACAGGTCAGCGGGTCGCCATTGCGGTGGTTGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGGTACGCCCAAGCACCTGCGCGCTGCTCCAGCCGAAGGTCTGGGTGAACGCCGGATTGATCTCGATGAACTGGCCAGTGTCCTGGCGTGTGACGCAGATCGGGTCGGGGCTGACCTGGAACAGGCTGGCAAACTTCTCTTCCGAGGCGCT > NC_002947/2248127‑2248420 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |