New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2337360 = | 46 (1.060) | 5 (0.120) | 5/236 | NT | 10.6% | coding (745/894 nt) | ybhD | DNA‑binding transcriptional regulator |
? | NC_002947 | 2337417 = | 42 (1.040) | coding (688/894 nt) | ybhD | DNA‑binding transcriptional regulator |
GCCTGAGTGGCAACCGCATGCTGCTGGACCATGCGTTGTCCGGGCTCAACCTGCGGCCCAAGTGGTTCTACGAAGTGCAACACCTGTCCACGTCGCTGGGCATGGTCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGG‑‑‑‑‑‑CCATGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2337512‑2337360 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatgcccaGCGACGTGGACAGGTGTTGCACTTCGTAGAACCACTTGGGCCGCAGGTTGAGCCCGGACAACGCATGGTCCAGCAGCATGCGGTTGCCACTCAGGCGGCCGACGCCGATCAGGCGGTAATCAGCCAGCTCTGTCCAGGTAACGGAGG > NC_002947/2337417‑2337563 GCCTGAGTGGCAACCGCATGCTGCTGGACCATGCGTTGTCCGGGCTCAACCTGCGGCCCAAGTGGTTCTACGAAGTGCAACACCTGTCCACGTCGCTGGGCATGGTCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGG‑‑‑‑‑‑CCATGC < 1:1005363/150‑1 GCCNGAGTGGCAACCGCATGCTGCTGGACCATGCGTTGTCCGGGCTCAACCTGCGGCCCAAGTGGTTCTACGAAGTGCAACACCTGTCCACGTCGCTGGGCATGGTCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGG‑‑‑‑‑‑CCATGC > 2:698287/1‑150 CCAAGTGGTTCTACGAAGTGCAACACCTGTCCACGTCGCTGGGCATGGTCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGG‑‑‑‑‑‑C > 1:314654/1‑88 CCAAGTGGTTCTACGAAGTGCAACACCTGTCCACGTCGCTGGGCATGGTCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGG‑‑‑‑‑‑C < 2:314654/88‑1 CTGGGCATGGTCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGGCCTCGACCATGCCCAGCGACGTGGACAGGTGTTGCACTTCGTAGAACCACTT > 1:877664/1‑101 CTGGGCATGGTCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGGCCTCGACCATGCCCAGCGACGTGGACAGGTGTTGCACTTCGTAGAACCACTT < 2:877664/101‑1 GTCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGG‑‑‑‑‑‑CCATGCCCAGCGACGTGGACAGGTGTTGCACTTCGTAGAACCACTTGGGCCGCAGGTTGAGCCCGGACAACGCATGGTCCAGCAGCATGCGGTTGCCACTCAGGCGGCCG > 1:969728/1‑150 TCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGG‑‑‑‑‑‑CCATGCCCAGCGACGTGGACAGGTGTTGCACTTCGTAGAACCACTTGG > 1:448242/1‑87 TCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGG‑‑‑‑‑‑CCATGCCCAGCGACGTGGACAGGTGTTGCACTTCGTAGAACCACTTGG < 2:448242/87‑1 CCCAGCGACGTGGACAGGTGTTGCACTTCGTAGAACCACTTGGGCCGCAGGTTGAGCCCGGACAACGCATGGTCCAGCAGCATGCGGTTGCCACTCAGGCGGCCGACGCCGATCAGGCGGTAATCAGCCAGCTCTGTCCAGGTAACGGAG < 2:1084894/150‑1 CCAGCGACGTGGACAGGTGTTGCACTTCGTAGAACCACTTGGGCCGCAGGTTGAGCCCGGACAACGCATGGTCCAGCAGCATGCGGTTGCCACTCAGGCGGCCGACGCCGATGAGGCGGTAATCAGCCAGCTCTGTCCAGGTAACGGAGG < 1:640737/150‑1 CCAGCGACGTGGACAGGTGTTGCACTTCGTAGAACCACTTGGGCCGCAGGTTGAGCCCGGACAACGCATGGTCCAGCAGCATGCGGTTGCCACTCAGGCGGCCGACGCCGATCAGGCGGTAATCAGCCAGCTCTGTCCAGGTAACGGAGG > 2:1110254/1‑150 GCCTGAGTGGCAACCGCATGCTGCTGGACCATGCGTTGTCCGGGCTCAACCTGCGGCCCAAGTGGTTCTACGAAGTGCAACACCTGTCCACGTCGCTGGGCATGGTCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGG‑‑‑‑‑‑CCATGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2337512‑2337360 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatgcccaGCGACGTGGACAGGTGTTGCACTTCGTAGAACCACTTGGGCCGCAGGTTGAGCCCGGACAACGCATGGTCCAGCAGCATGCGGTTGCCACTCAGGCGGCCGACGCCGATCAGGCGGTAATCAGCCAGCTCTGTCCAGGTAACGGAGG > NC_002947/2337417‑2337563 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |