New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 308221935 (0.810)5 (0.120) 5/238 NT 12.2% coding (339/1719 nt) PP_2691 hypothetical protein
?NC_002947 = 3082250 39 (0.960)coding (308/1719 nt) PP_2691 hypothetical protein

GCGACCTTCTGCCAGCGCCGCCAGAAACCGGTCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3082066‑3082219
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcgccgACCAGTGGGACGTCAGCTTCGTGCTGGTGGCCGGCGATGTCGACTCGGCACAACTGGCCGACCTGCAACGCAACGTGCCGCTGCAGGAAGCCGGCCGCTTCGATGCACGCGTGCTGGTGTTGTCGCGGGCCAACCGTAGCTTGCGCAAT  <  NC_002947/3082250‑3082102
                                                                                                                                                                                                                                                                                                               
GCGACCTTCTGCCAGCGCCGCCAGAAACCGGTCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATC                                                                                                                                                           >  2:608432/1‑150
  GACCTTCTGCCAGCGCCGCCAGAAACCGGTCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCTGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGC                                                                                                                                                         >  1:650524/1‑150
  GACCTTCTGCCAGCGCCGCCAGAAACCGGTCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGC                                                                                                                                                         >  1:1120066/1‑150
     CTTCTGCCAGCGCCGCCAGAAACCGGTCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGA                                                                                                                                                      >  1:1069764/1‑150
                    CCAGAAACCGGTCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCC                                                                                                                                                        >  1:1053090/1‑133
                    CCAGAAACCGGTCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCC                                                                                                                                                        <  2:1053090/133‑1
                               TCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGACCAGTGGGAC                                                                                                                                            >  1:428961/1‑134
                               TCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGACCAGTGGGAC                                                                                                                                            <  2:428961/134‑1
                                          CAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGACCAGTGGGACGTCAGCTTCGTGCTGGTGGCCGGCGAT                                                                                                                 <  2:1069764/150‑1
                                                                                                   CTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGACCAGTGGGACGTCAGCTTCGTGCTGGTGGCCGG                                                                                                                     <  1:352781/89‑1
                                                                                                   CTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGACCAGTGGGACGTCAGCTTCGTGCTGGTGGCCGG                                                                                                                     >  2:352781/1‑89
                                                                                                                                                       CCGACCAGTGGGACGTCAGCTTCGTGCTGGTGGCCGGCGATGTCGACTCGGCACAACTGGCCGACCTGCAACGCAACGTGCCGCTGCAGGAAGCCGGCCGCTTCGATGCACGCGTACTGGTGTTGTCGCGGGCCAACCGTAGCTTGCGCA    >  1:148681/1‑150
                                                                                                                                                         GACCAGTGGGACGTCAGCTTCGTGCTGGTGGCCGGCGATGTCGACTCGGCACAACTGGCCGACCTGCAACGCAACGTGCCGCTGCAGGAAGCCGGCCGCTTCGATGCACGCGTGCTGGTGTTGTCGCGGGCCAACCGTAGCTTGCGCAAT  <  1:951323/150‑1
                                                                                                                                                                                                                                                                                                               
GCGACCTTCTGCCAGCGCCGCCAGAAACCGGTCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3082066‑3082219
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcgccgACCAGTGGGACGTCAGCTTCGTGCTGGTGGCCGGCGATGTCGACTCGGCACAACTGGCCGACCTGCAACGCAACGTGCCGCTGCAGGAAGCCGGCCGCTTCGATGCACGCGTGCTGGTGTTGTCGCGGGCCAACCGTAGCTTGCGCAAT  <  NC_002947/3082250‑3082102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.